Gene Sros_8376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8376 
Symbol 
ID8671710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9241637 
End bp9245323 
Gene Length3687 bp 
Protein Length1228 aa 
Translation table11 
GC content74% 
IMG OID 
ProductSuperfamily I DNA and RNA helicase-like protein 
Protein accessionYP_003343764 
Protein GI271969568 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGAGCC CGATCCAGCT CGCCGCCAAG CTGGGCATCC TTCCCCCCAC CCCCGAACAG 
GCCGAGGTGA TCGAGGCCGG TCTCGAACCC ATGGTCGTGG TCGCCGGAGC CGGGTCGGGC
AAGAGCGAGA CCATGGCCGG GCGGGTCGTC TGGCTGGTGG CCAACGGCCT CGTCCGCCCC
GAACAGGTGC TCGGCCTGAC CTTCACCAGG AAGGCCGCCG GCGAGCTGGC CATCCGGGTC
CGCGAGCGGC TCAACGGCCT CGTCGCGGCC GAGCAGGTCC CCGCCGAGCT GCTGGAGGGC
GAGCCGACCA TCTCGACCTA CCACGCCTAC GCAGCCAGGC TGGTCACCGA CCATGCCCTG
CGTGAGGCGC TGGAGCCCAC CATGCGCCTG GTCAGCCCGG CCGTCTCCTG GCAGCTCGCC
GTGCGGGTGG TCAGCGCCTA CGACGGGCCC ATGGAGCAGA TCGAGTGGGG TCCGGCCACC
GTCACCCGGG CGGTGCTGGA GCTGGCCGGG GAGCTGTCCG AGCACCTGCG CGGCCCGCAG
GACGTGCGGG AGGTCGGCGC CTGGCTCGCC GACCGGTACG GCGAGCTGCC CGGCTCGCCC
ACCCTGCCCC AGCGCAGGCC GCTGGCCACC CAGCGGGCCA GGGAGCAGCT CCTGCCGCTG
GTCGAGGCCT ACGACCGGCT CAAACGGAGC CGTGAGGTCG TCGACCACGG CGACCAGATG
GCGCTGGCCG CCCGGATCGC CGCCAAGCAC GCCGAGGTCG GCGAGATCGA GCGGGGCCGG
TTCGCCGTCG TCCTCCTCGA CGAGTACCAG GACACCAGCC ACGCCCAGCT CGTCCTGCTC
CGCTCGCTGT TCGGCGGAGG TCACCCGGTG ACCGCCGTGG GCGACCCCTG CCAGTCCATC
TACGGCTGGC GCGGCGCCTC GGCGGGCAAC CTCACCCGCT TCCCCCGCGA CTTCACGACC
GCCTCGGGGG AACTTGCGCC GGTCCGCCGC CTGTCGATCA GCTTCCGCAA CGGCGACGCC
GTACTGGACG TCGCCGCCCG GGTGCAGCTC CCGCTCCGGA TGGAGGCGCG GGAGGTGCCG
GTGCTGGTGC CCGGCGGCAA CCGGGTCGAG CGCGGCCGGG TGGTGTGCGC CTTCCACGAG
ACCGCCGACG ACGAGGCGGC GTGGGTCGCC GACGGGATCG CCAGGGTGCT GGGCGGTGAG
AGCGCGCCCG ACGGCATGCC GTGGGGTGAG GGCGAGCGGA AGAAGGCCAA GCAGAGCGCG
TGGGGCGGCC CGCAGTGCCT GCAGCCGCAC GACGTGGCGA TCCTGGCCCG CAAGCGGTCG
CAGTTCCCCG CGCTGCGCCG GGCGCTGGAG GAGCGGGGGA TCCCGGTCGA GGTGGTCGGC
CTGGGGGGCC TGCTGACCGT GCCGGAGGTC TCCGACATCG TCGCCACCCT GCGCGTGCTC
TACGACCCGA CCGCGGGCGA CGCGCTGGTC CGGCTGCTGT CCGGTCCCCG GTGGCGGATC
GGCCCGGCCG ACCTGAAGGA GCTGGGCGAG CGGGCGCGTG AGCTGAACCG TGAGACCCGG
GAGGGCGGAT CCATGGCGTC CGACCCGCTG GACCAGGTCG TGGCGGACAT GGCCGAGGAG
CGCGGCAGCC TGATCGACGC CCTCGACGAG CTGCCCGACC GTCCCGAGTG GCAGGACCTG
TTCTCACCCC TGGCCCGGGT ACGGCTGCTC GCCATGGCGC AGGAGCTGCG GATCCTGCGC
GCCCACACCG GCCAGCCGCT CCCCGACCTG ATCATCGAGA TCGAGCGGAG GCTCGGCCTG
GACATCGAGG TGGCGGCGCG GGGGACGGCC ATCGGGCCGT TCGCCGCCCG GGCCGATCTG
GACGCCTTCC TCGACGCGGC CGCCCGGTTC GCGGGCGACT CCGAGGATCC GACGCTGGGC
GCGTTCCTCG CCTTCCTCAA GGCGGCCGAC GAGGAGGAGA ACGGCCTGGA CGCCGGGCGG
GTGGGGGAGA GCAACAGCGT CAAGCTGATG ACCATCCACG CCTCCAAGGG CCTGGAGTGG
CCGGTCGTCG TGATCCCCGG CATGTCCCAG GCGCTGTCCA AGGCCGGCAC CCTGACCGTC
GGCACGATGT TCCCGGCCCG CCCGACGACC AGCCCCAAGT GGACGGACAA CCCGCGCAAG
CTGCCCTACC CGCTCCGCGG CGACGCCTCC GACCTGCCCC GGCTGGGCGG GCTGAGCAAG
GAGGAGCTGG CGGAGTTCGA CGAGCGCTGC CGTGACCGCG ATCTGCTGGA GGAGCGCCGC
CTGGCCTACG TGGCCGTCAC CCGCGCCCAC TACCTCCTGA TCGCCTCCGG CTACCGCTGG
GGCAGCGCGG CCAAGCCCCT GGAGCCCTCC GACTTCCTGG TGGAGATCCG CGAGACCTGC
GGGCGCGTCT CCGTCTGGGC GCCCGAGGCC GGCGAGGGCG CCACCAACCC CCTGCTCGCC
GAACCCGCCG AGGCCGGCTG GCCCGTCACC CCCGACGGCC TCCGCTACGA GGCCGTCCTC
GACGGGGCCA CCATGGTCGA GGCCGCCCTC GCCGCCCTCG CCGGGCAGGG CGGCGACCCG
GCCGCCTCCC GCCCTCGGGA CGGTTCCGCC CAGGCTCCCG GAGCCGAGAA CGCCCCCTTT
TCCGATTTTT CCGATATCCC CTTCCCTGAC GTCCCTCCGG AGGACGAGGA GGTTCCCTTC
CCCGAGGCGC CCGAGGACGA GGACGTCCTC TTCCTGGAGG TCCCGGAGTT CTTCGACGAC
CCGGACGACG AGGAGGCCAC TTCTCGCGCT CGGCAGGACG TCTCGGCCGA GGCCGTACAC
GAGGCCGTGC ACGAGGCCGT GCATGAGGGC GGGCGCGTGC CCGGGGAGGA GCCGGGGAAC
GGGCATGTGC TGCCCGAGGG GGAGCCGGGA CCGGAGCACC GGCGGGTTCC CGAGGAGGGG
CAGGAGCCGG GGAACGAGCG CGCCGGTGCC CTCGCGGACT TGCGCGGCTG GGACAAAGAG
CGGGCGAAGG CCTGGGAGCG CGACACCGAG CTCCTGCTCA GGGAGCGGGC CGTGAACCGG
CGGCGCGGTG GCGGGCAGGT CGAGCTGCCC ACCCATCTGA CCGTCTCGTC GCTGGTCACC
CTGGCCTCCG ATCCCAAGAC CCTGGCCCGG CAGGTCCGCC GCCCGGTGCC CAGGAAGCCC
ACCCCGCTGG CCCGCCGGGG CACCTCCTTC CACCGCTGGC TGGAGTCGCG GTGGGGTCAG
CAGCGGCTGC TCGACGAGAT GGAGCTGCCG GGCTCGTCCG ACGGCTTCGA GGAGACCGAC
ATCCAGCTCG ACCAGCTGCG TGACCGGTTC GAGGAGAGCG AGTGGGCCGG CCGGGAACCG
CTGGACGTCG AGGTCCCCTT CGAGACGATG ATCGCCGACC GGCTGGTCCG GGGCCGGATG
GACGCGGTGT TCGAGCTCCC GGACGGCCGC TACGAGGTCG TCGACTGGAA GACGGGTCAG
CGTCCCGAGG GCAAGAAGGC CGAGGCCGCC GCGGCGGTCC AGCTCGCCGC CTACCGTCTG
GCCTGGTCCC ACCTGGCCGA CGTCCCCCTC GCCCAGGTGA GCGCCGCCTT CCACTTCGTC
CGCCTCAACG AGACGGTCAG GCCGGTCAAC CTCCTCGACG AGCGGGGCCT GGTCAGGCTC
ATCGAGTCGA TCCCTGCCCT CGGCTGA
 
Protein sequence
MLSPIQLAAK LGILPPTPEQ AEVIEAGLEP MVVVAGAGSG KSETMAGRVV WLVANGLVRP 
EQVLGLTFTR KAAGELAIRV RERLNGLVAA EQVPAELLEG EPTISTYHAY AARLVTDHAL
REALEPTMRL VSPAVSWQLA VRVVSAYDGP MEQIEWGPAT VTRAVLELAG ELSEHLRGPQ
DVREVGAWLA DRYGELPGSP TLPQRRPLAT QRAREQLLPL VEAYDRLKRS REVVDHGDQM
ALAARIAAKH AEVGEIERGR FAVVLLDEYQ DTSHAQLVLL RSLFGGGHPV TAVGDPCQSI
YGWRGASAGN LTRFPRDFTT ASGELAPVRR LSISFRNGDA VLDVAARVQL PLRMEAREVP
VLVPGGNRVE RGRVVCAFHE TADDEAAWVA DGIARVLGGE SAPDGMPWGE GERKKAKQSA
WGGPQCLQPH DVAILARKRS QFPALRRALE ERGIPVEVVG LGGLLTVPEV SDIVATLRVL
YDPTAGDALV RLLSGPRWRI GPADLKELGE RARELNRETR EGGSMASDPL DQVVADMAEE
RGSLIDALDE LPDRPEWQDL FSPLARVRLL AMAQELRILR AHTGQPLPDL IIEIERRLGL
DIEVAARGTA IGPFAARADL DAFLDAAARF AGDSEDPTLG AFLAFLKAAD EEENGLDAGR
VGESNSVKLM TIHASKGLEW PVVVIPGMSQ ALSKAGTLTV GTMFPARPTT SPKWTDNPRK
LPYPLRGDAS DLPRLGGLSK EELAEFDERC RDRDLLEERR LAYVAVTRAH YLLIASGYRW
GSAAKPLEPS DFLVEIRETC GRVSVWAPEA GEGATNPLLA EPAEAGWPVT PDGLRYEAVL
DGATMVEAAL AALAGQGGDP AASRPRDGSA QAPGAENAPF SDFSDIPFPD VPPEDEEVPF
PEAPEDEDVL FLEVPEFFDD PDDEEATSRA RQDVSAEAVH EAVHEAVHEG GRVPGEEPGN
GHVLPEGEPG PEHRRVPEEG QEPGNERAGA LADLRGWDKE RAKAWERDTE LLLRERAVNR
RRGGGQVELP THLTVSSLVT LASDPKTLAR QVRRPVPRKP TPLARRGTSF HRWLESRWGQ
QRLLDEMELP GSSDGFEETD IQLDQLRDRF EESEWAGREP LDVEVPFETM IADRLVRGRM
DAVFELPDGR YEVVDWKTGQ RPEGKKAEAA AAVQLAAYRL AWSHLADVPL AQVSAAFHFV
RLNETVRPVN LLDERGLVRL IESIPALG