Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_8309 |
Symbol | |
ID | 8671637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 9170888 |
End bp | 9171607 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | putative transcriptional regulator, GntR family |
Protein accession | YP_003343700 |
Protein GI | 271969504 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0848138 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGGACG ACTCCCCCAG GATTCCCAAG TACTACGACG TCAAACGTAG TCTGCTCGCG CTGACCAAGT CCCTGTCGGC GGGCAGCGCG CTGCCCCCCG AGCGGACCCT GGCGGTGCGC TTCGAGACGT CGCGCACCAC CGTGCGGCAG GCGCTGTCGG AGCTGGTGGT CGAGGGCCGC CTGGTGCGCA TCCAGGGCAA GGGAACGTTC GTCGCGCACC CCAAGGTCGC CCAGGTCCTC CAGCTGACGT CCTACACCGG CGACCTGCGG ACCGTCGGCC TCGAACCCGA CACCAAGATC CTCGACATCA GCTACATCAC CGCCGACGAG CCCCTGGCGC GCCGGCTGGC GATCAACCCC GGCGGCCGGG TGCTGCGCAT CCACCGGCTG CGCCTGGCCA ACGGCGAGCC GATGTCGATC GACACCACCC ACCTGTCGGC CCGGCGCTTC CCCCGCCTCC GGCGCGAGCT GGAGGTGCAC TCCTCCCTGT ACGAGACGCT GCACAACGCC TACAACGTGC GGCTGACAGA CGCCGAGGAG ATCATCGAGA CCGTGCTGGC CACGCCGTAC GACGCGCAGG TGCTGAGCGT CGACGTCGGC CTGCCGATGC TGCTGCTCAC CCGGCACGCC TTCGACGCCG ACGGCAATCC GGTGGAGTGG GCCCAGTCCC TCTACCGCGG CGACCGATAC AAGTTCGTCA CCCGCCTGCG CCGTCCCTGA
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Protein sequence | MTDDSPRIPK YYDVKRSLLA LTKSLSAGSA LPPERTLAVR FETSRTTVRQ ALSELVVEGR LVRIQGKGTF VAHPKVAQVL QLTSYTGDLR TVGLEPDTKI LDISYITADE PLARRLAINP GGRVLRIHRL RLANGEPMSI DTTHLSARRF PRLRRELEVH SSLYETLHNA YNVRLTDAEE IIETVLATPY DAQVLSVDVG LPMLLLTRHA FDADGNPVEW AQSLYRGDRY KFVTRLRRP
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