Gene Sros_8277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8277 
Symbol 
ID8671605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9133916 
End bp9134926 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content68% 
IMG OID 
ProductABC transport system substrate-binding protein 
Protein accessionYP_003343668 
Protein GI271969472 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0627957 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCAAGC TCAGACATGT CCCCCTCTCC GTGCTGCTGG TGGGGCTCCT CACCGCCTGC 
GGCGCGCGGG CCGCCGCGGA ACCCGGCGGC CCCGAGACCC TGGAGCTCCG CTACCAGGGC
AGCGCCGGCG CCGTCACCTT CCCCGAGTTC GCCGAGGAGC TCGGCTACCT CGGCCCCATC
AAGCTCAAGT GGATCGGCAA CACGATCTCC GGTCCGCAGG ACATCCAGGC CGCGGCCACC
GGTCAGACCG ACTTCGGCGG CGCCTTCAAC GGCGCCATCG TCAAGCTGGC CGCGGCCAAG
GCCCCGATCA AGGCCGTGAT CGGCTACTAC GGCAGCGACA AGGACAGCTA CATCGGCTAC
TTCGTGGCCG ACGGCTCACC GATCAAGGGC CCGCGCGACC TGATCGGCAA GAAGATCGGG
GTCAACACCC TGGGCGCGCA TCTGGAGGCG GTGCTCAAGG AGTACCTCAA GCGCGGCGGG
CTGACCCCCG ATGAGATCAA GCAGGTCGAA CTGGTCGTCG TGCCGCCGGT CAACACCGAG
CAGGCGCTCC GCCAGGGCCA GATCGACGTG GCCGCGCTGA GCGGCATCCT CCGCGACAAG
GCGCTGCGGC GCGGCGGGAT CCGCCCGCTC TTCAAGGACG TCGACCTGTT CGGCCCCTTC
ACCGCCGGGA GCGTCGTGCT CACCGAGCGG TTCATCGAGC GGAACCCGAA CACCACGAAG
AGGTTCGTCG AGGCCTTCGC CAGGGCCGTC GACTGGACGC AGACCCACTC CCGCGAGGAG
GTCGTCGCCA AGGCGAAAGA GATCATCGCC AAGCGGAAGC GGAGCGAGGA CACCACCGCC
ATCGAGTTCT GGAAGAGCAG CGGGGTGGCC AACAAGGGCG GCGTGATCGA CGCCAGGGAG
TTCCAGACCT GGGTCGACTG GCTGGAGCGC GAGGGCGAGA TCAAGAAGGG GCAGGTCAGG
ACCGAGGACC TCTTCACCAA TGCCTACAAC CCGTTCGGAG GCACCCGATG A
 
Protein sequence
MIKLRHVPLS VLLVGLLTAC GARAAAEPGG PETLELRYQG SAGAVTFPEF AEELGYLGPI 
KLKWIGNTIS GPQDIQAAAT GQTDFGGAFN GAIVKLAAAK APIKAVIGYY GSDKDSYIGY
FVADGSPIKG PRDLIGKKIG VNTLGAHLEA VLKEYLKRGG LTPDEIKQVE LVVVPPVNTE
QALRQGQIDV AALSGILRDK ALRRGGIRPL FKDVDLFGPF TAGSVVLTER FIERNPNTTK
RFVEAFARAV DWTQTHSREE VVAKAKEIIA KRKRSEDTTA IEFWKSSGVA NKGGVIDARE
FQTWVDWLER EGEIKKGQVR TEDLFTNAYN PFGGTR