Gene Sros_8260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8260 
Symbol 
ID8671588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp9119426 
End bp9120607 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content73% 
IMG OID 
ProductROK family protein 
Protein accessionYP_003343652 
Protein GI271969456 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00405696 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGAAGCGCA TTACCGCTCG GCCGGAGAAC CCCCACCAGG CCGCGCTGCT CCGGCTGCTG 
CGAGAGCGGG CGCGGTCGCG TGCCGAGCTC GGCGACGTGG CCGAGCTCTC ACGCTCCAGG
CTCAACCTCG AACTCGACCG GCTGGTCGAG CTGCGGCTGG TCGAGCAGGC GGGCCTGGCG
GCCTCGCGCG GCGGACGCAG GTCGGGCATG GTACGGCTGG CCGCGACCAT GCGGTTCGCC
GGCATCGACG TCGGCGCCAC CTCGGTCGAC GTGGCCGTCA CCGACGGCGG GCTGGAGGTC
CTCGGCCGCG CGAGCGAGCC CTGCGACGTG CGCGACGGAC CGGTGGCCGT GCTGGACCGG
GCCACCGAGA TGCTCGCCAA GCTGCGCGAC CAGGGACTGT TCACCCAGCT CCACGGAGCG
GGGATCGGCG TCCCCGGGCC GGTCAGCTTC CGGGAGGGAG TGCCGGTCGC GCCGCCGATC
ATGCCCGGCT GGGACCGCTA CCCCGTCAGG GAGACGCTCG GGCAGGAGCT CGGCTGTCCC
GTGGTGGTCG ACAACGACGT CAACATCATG GCCCTCGGCG AGCTCCACGC GGGGCTGGCC
AAGCAGGTCG ACGACTTTCT CTTCGTCAAG ATCGGCACCG GGATCGGCTG CGGGATCGTG
GTGGACGGCA AGATCTACCG GGGTGTCTCC GGCAGCGCCG GCGACATCGG CCACATCCGC
GTCGACGACG CCGGCCCCAT CTGCGCCTGC GGCAACGCCG GCTGTCTTGA GGCCTATTTC
GGCGGTGCCG CTCTCGCCAG GGAGGCCACG GCCGCCGCCG AGCGCTCGCC GTACCTCGGT
GAGCGGCTCC GGCGGACGGG CACGCTCACC GGCGAGGACG TCGCCGCGGC GGCCGCGCTG
GGCGACGCCG AGGCGGTGCG GCTGATCCGT GACGGCGGCC ACCGGGTCGG CCTGGTGCTG
GCCGGGCTCG TCAGCTTCTT CAACCCCGGC CTTGTGATCG TCGCCGGAGG CGTGGCCCGG
CTGGGCCACC TGCTGCTGGC GGAGATCAGA AGCGTCGTCT ACCGCCGGTC GCTGCCCCTG
GCGACGGGCA ACCTGCCCAT CGTGCTGTCG GAGCTCGGCG ACAGCGCCGG AGTGATCGGC
GCGGCCCGGC TCTGCAGCGA CCACGTTTTC TCGGCTCCAT GA
 
Protein sequence
MKRITARPEN PHQAALLRLL RERARSRAEL GDVAELSRSR LNLELDRLVE LRLVEQAGLA 
ASRGGRRSGM VRLAATMRFA GIDVGATSVD VAVTDGGLEV LGRASEPCDV RDGPVAVLDR
ATEMLAKLRD QGLFTQLHGA GIGVPGPVSF REGVPVAPPI MPGWDRYPVR ETLGQELGCP
VVVDNDVNIM ALGELHAGLA KQVDDFLFVK IGTGIGCGIV VDGKIYRGVS GSAGDIGHIR
VDDAGPICAC GNAGCLEAYF GGAALAREAT AAAERSPYLG ERLRRTGTLT GEDVAAAAAL
GDAEAVRLIR DGGHRVGLVL AGLVSFFNPG LVIVAGGVAR LGHLLLAEIR SVVYRRSLPL
ATGNLPIVLS ELGDSAGVIG AARLCSDHVF SAP