Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_8260 |
Symbol | |
ID | 8671588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 9119426 |
End bp | 9120607 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | ROK family protein |
Protein accession | YP_003343652 |
Protein GI | 271969456 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00405696 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGAAGCGCA TTACCGCTCG GCCGGAGAAC CCCCACCAGG CCGCGCTGCT CCGGCTGCTG CGAGAGCGGG CGCGGTCGCG TGCCGAGCTC GGCGACGTGG CCGAGCTCTC ACGCTCCAGG CTCAACCTCG AACTCGACCG GCTGGTCGAG CTGCGGCTGG TCGAGCAGGC GGGCCTGGCG GCCTCGCGCG GCGGACGCAG GTCGGGCATG GTACGGCTGG CCGCGACCAT GCGGTTCGCC GGCATCGACG TCGGCGCCAC CTCGGTCGAC GTGGCCGTCA CCGACGGCGG GCTGGAGGTC CTCGGCCGCG CGAGCGAGCC CTGCGACGTG CGCGACGGAC CGGTGGCCGT GCTGGACCGG GCCACCGAGA TGCTCGCCAA GCTGCGCGAC CAGGGACTGT TCACCCAGCT CCACGGAGCG GGGATCGGCG TCCCCGGGCC GGTCAGCTTC CGGGAGGGAG TGCCGGTCGC GCCGCCGATC ATGCCCGGCT GGGACCGCTA CCCCGTCAGG GAGACGCTCG GGCAGGAGCT CGGCTGTCCC GTGGTGGTCG ACAACGACGT CAACATCATG GCCCTCGGCG AGCTCCACGC GGGGCTGGCC AAGCAGGTCG ACGACTTTCT CTTCGTCAAG ATCGGCACCG GGATCGGCTG CGGGATCGTG GTGGACGGCA AGATCTACCG GGGTGTCTCC GGCAGCGCCG GCGACATCGG CCACATCCGC GTCGACGACG CCGGCCCCAT CTGCGCCTGC GGCAACGCCG GCTGTCTTGA GGCCTATTTC GGCGGTGCCG CTCTCGCCAG GGAGGCCACG GCCGCCGCCG AGCGCTCGCC GTACCTCGGT GAGCGGCTCC GGCGGACGGG CACGCTCACC GGCGAGGACG TCGCCGCGGC GGCCGCGCTG GGCGACGCCG AGGCGGTGCG GCTGATCCGT GACGGCGGCC ACCGGGTCGG CCTGGTGCTG GCCGGGCTCG TCAGCTTCTT CAACCCCGGC CTTGTGATCG TCGCCGGAGG CGTGGCCCGG CTGGGCCACC TGCTGCTGGC GGAGATCAGA AGCGTCGTCT ACCGCCGGTC GCTGCCCCTG GCGACGGGCA ACCTGCCCAT CGTGCTGTCG GAGCTCGGCG ACAGCGCCGG AGTGATCGGC GCGGCCCGGC TCTGCAGCGA CCACGTTTTC TCGGCTCCAT GA
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Protein sequence | MKRITARPEN PHQAALLRLL RERARSRAEL GDVAELSRSR LNLELDRLVE LRLVEQAGLA ASRGGRRSGM VRLAATMRFA GIDVGATSVD VAVTDGGLEV LGRASEPCDV RDGPVAVLDR ATEMLAKLRD QGLFTQLHGA GIGVPGPVSF REGVPVAPPI MPGWDRYPVR ETLGQELGCP VVVDNDVNIM ALGELHAGLA KQVDDFLFVK IGTGIGCGIV VDGKIYRGVS GSAGDIGHIR VDDAGPICAC GNAGCLEAYF GGAALAREAT AAAERSPYLG ERLRRTGTLT GEDVAAAAAL GDAEAVRLIR DGGHRVGLVL AGLVSFFNPG LVIVAGGVAR LGHLLLAEIR SVVYRRSLPL ATGNLPIVLS ELGDSAGVIG AARLCSDHVF SAP
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