Gene Sros_8043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_8043 
Symbol 
ID8671371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp8853876 
End bp8854508 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content71% 
IMG OID 
ProductCell wall-associated hydrolase (invasion- associated protein)-like protein 
Protein accessionYP_003343441 
Protein GI271969245 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.433259 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGGAA CCATCCTGTC CGGCAAGATT TACCCCCGCG TCCTGACCCT TCTCGTCGCC 
GGCACCACCG TGTTCGCGAC CCCGTCCCTC GCGCAGGCCG ACACTCCCGC CCCCGCCCCC
TCCCCCGCCC CCTCGCCTGA GGCCACGACG CTCACCGGCC CCAAGCTCAA GGAGATCCTC
GCCGAGCAGG CCCCCAAGCC CGCTTGGAAG AAGGCCCTGA AGTGGGCCAT GGCCCAGCGC
GGCACCCCGT ACGTCTGGGG CGGCACCGGC CGCGGCGGCT TCGACTGCTC CGGCCTGATG
CTCCGCGCCT ACGGCGCCGC CGGGATCAAG CTGCCCCGCG TCGCCGCCGA CCAGTACCGC
GCGTTCTCCA AGAAGATCGC CTGGAAGAAC CTCAAGCCCG GCGACCTGGT CTTCTTCCAC
GGCCTCGGCC ATGTCGGCAT GATCAGCAAG CCCGGCTACA TGGTGCACGC CCCGCAGAGC
GGCGACGTGG TCAAGGAGGA GAAGCTCAAC GCCTGGCGCC GCAGCAGCTT CGTCGGCGGC
GTCCGCCCCG ACCCCGCGGG CGTCAAGCTC TCCGTCGAGC AGGCCAAGCG CGCGGCCGAA
CCCGCCCCCA CGATGCTCGA GGCCACCGCC TGA
 
Protein sequence
MEGTILSGKI YPRVLTLLVA GTTVFATPSL AQADTPAPAP SPAPSPEATT LTGPKLKEIL 
AEQAPKPAWK KALKWAMAQR GTPYVWGGTG RGGFDCSGLM LRAYGAAGIK LPRVAADQYR
AFSKKIAWKN LKPGDLVFFH GLGHVGMISK PGYMVHAPQS GDVVKEEKLN AWRRSSFVGG
VRPDPAGVKL SVEQAKRAAE PAPTMLEATA