| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_7979 |
|---|
| Symbol | |
|---|
| ID | 8671304 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 8793255 |
|---|
| End bp | 8793776 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
|---|
| Protein accession | YP_003343377 |
|---|
| Protein GI | 271969181 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.262256 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.180906 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTGACG AGCTACTTGT GATCCGCTGC CAGCTCGGCG AGCGCGAGGC GCTCACGGAG
CTGGTCCGGG CCTGGCACGA CCCGATATGG ACCTACGTAC GGCGCATGCT CGGGTCGGCG
GAGGCCGACG ACGTGAGCCA GGAGGTCTGG CTGGCCGTAC TCCGCGGGCT CCCCCGGCTC
AAGGAACCCG GCAGGTTCGC GCCGTGGCTT TTCACGATCG CCCGGCGCGC GGTGGCCAAC
AGGCTGCGGG AGGAGTACGG CAGGCCGGAG GCGGCGGCCG AGGGCGAGCC GGTGGCGCAG
GACGCGGCGA CCGCCCTCGT GGACCGCGCC GAGCTGGTCG CGGGGCTGTC CGGGCTGCCG
GTCCGCGAGC GGGAGATCCT CGTGCTGTTC TACCTGGAGG ACCTCTCGGT GGAGGACTGC
GCCGAGATCT GCGCCGTGCC GGTCGGCACC GTCAAGTCAC GCCTGTCCCG CGCGCGGCGC
ATGTTGCGCG ACCACCTGAC GGAGAAGGGA TACCGACGTT GA
|
|---|
| Protein sequence | MTDELLVIRC QLGEREALTE LVRAWHDPIW TYVRRMLGSA EADDVSQEVW LAVLRGLPRL
KEPGRFAPWL FTIARRAVAN RLREEYGRPE AAAEGEPVAQ DAATALVDRA ELVAGLSGLP
VREREILVLF YLEDLSVEDC AEICAVPVGT VKSRLSRARR MLRDHLTEKG YRR
|
|---|
| |