Gene Sros_7924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_7924 
Symbol 
ID8671249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp8735438 
End bp8736652 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content75% 
IMG OID 
ProductMFS family transporter 
Protein accessionYP_003343323 
Protein GI271969127 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.645684 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGATC GGGGACTCAG GTTGTCGCGA GTCCTGCTGA TCGCGGGGTT CGTGCTGGCC 
TCGCTCAACC TGAGGCCCGC GCTGGCCGGG GTCTCCCCGG TGCTGAGCGA GATCATGGCC
GACCTCGGGC TGAGCGCGGC CGGCGGCGGG GCGATCACCA CGGTGATGGT GGTCTGCCTG
GGCGTGCTGG CCCCGCTCGC CCCGCTGCTG GCCCGCCGGT TCGGCCTGGA CCGGACGCTG
CTGGCCGGGC TGCTGATCCT GGCCGCCGGG GTGGCGCTGC GCGCCGCAGG GAGCGTCCCG
GCCCTCTACG CGGGGGCGGC CGTCGCCGGT ACGGCCATCG CCATCATGAA CGTGGTGATG
CCCGCCGTCG TCAAGCAGCA CTTCCCCTCC AAGGTCGGCC TGTTCACCTC GGTGTACGTC
TCCGGCCTCG TGCTGGGCGC CGCCGCCGCG TCCGGGCTGA CGGTGCCGCT GGAGCGCGCC
GGCGGGTACG GCTGGCGCGA GGTGACCGCG ATGGCCGCCG TCCCGGCCGT GGCGGCGGCC
GTGCTCTGGC TGCCCCAGGC GCTGCGGCGC CCGGCGCGCG GGGGAGCCGC GCCCCGGTCC
TTCCGCGCGG TGCTGGGCAG CCGGACGACC TGGGCCGTCA CCGCCTACAT GGGCCTCCAG
TCGCTGACCT TCTACATCAT GCTCGCCTGG GTTCCCACGA TCTTCCGCGA CGCGGGGCTC
CCCGCCGACC AGGCGGGCTA CATGCTCGGC CTGACCAACC TCGCGCAGAT CGCCGCCACG
CTCACGGTCC CGGTCCTCGC GGGCAGGGTC CGGTCGCAGG TGCCGCACGT GACGGTCGCG
GCCGTGCTCA CCATCGTGGG ATACGTCGGC GTGCTGGTCG CGCCGGCCAC CGTCCCCTGG
CTGTGGATGG TCGTTCTCGG CCTGGGGCAG GGCGCCTCGA TCGCGCTCGC CCTGCTGATC
ATCGCGCTCC GCGCCCCCGA CCCCGCCTCG GTCACCGCGC TGTCGGCCGT CGCCCAGTCC
GCCGGATACG TGCTGGCGGC GCTCGGCCCC TTCCTGATCG GCGTGCTCCG CCAGAGCTCG
GGCGGCTGGA CGCTGCCGCT GCTGGCCGGG CTCGGCGCGT GCGGGCTGCA ACTGGTCGCC
GGGTTCCTGG CAGGCCGCCC GGTGGCCACC GCCGCGGAGA GGGCGCGGGC CGCCACCGTC
ACGGAACGGG GCTGA
 
Protein sequence
MTDRGLRLSR VLLIAGFVLA SLNLRPALAG VSPVLSEIMA DLGLSAAGGG AITTVMVVCL 
GVLAPLAPLL ARRFGLDRTL LAGLLILAAG VALRAAGSVP ALYAGAAVAG TAIAIMNVVM
PAVVKQHFPS KVGLFTSVYV SGLVLGAAAA SGLTVPLERA GGYGWREVTA MAAVPAVAAA
VLWLPQALRR PARGGAAPRS FRAVLGSRTT WAVTAYMGLQ SLTFYIMLAW VPTIFRDAGL
PADQAGYMLG LTNLAQIAAT LTVPVLAGRV RSQVPHVTVA AVLTIVGYVG VLVAPATVPW
LWMVVLGLGQ GASIALALLI IALRAPDPAS VTALSAVAQS AGYVLAALGP FLIGVLRQSS
GGWTLPLLAG LGACGLQLVA GFLAGRPVAT AAERARAATV TERG