Gene Sros_7804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_7804 
Symbol 
ID8671127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp8597179 
End bp8598228 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content70% 
IMG OID 
Productaliphatic sulfonate substrate binding component of ABC transporter 
Protein accessionYP_003343213 
Protein GI271969017 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.293693 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGACAT CTCGTCGACG GACACGCGCC GCGGTCGCGG TCGCGGCACT TTCGGTCGCG 
GCGCTCACCG CCGCCTGCGG AGGCGCCGCG ACCGGCACCG GCAAGACGAC GACAGCGGCG
GCAGCAGCGG GGAGCGGGGG CGGCGGGGCC GTACTCAAGA TCAAGGATCC GGGGAACGCG
GGGCCGCTGG CGGTGGCGAA GAAGGAGGGG ATCCTCGAGA AGCGGCTGGC CGAGATCGGG
GCGAAGGTCG AGTGGGGCGG ATCGTACGCC TCGTTCACCG CCACGATCGA CGCGGTCCGC
TCCGGATCGA TCAACGTGCT GGAGGGGGCC ATCTCGCCCG TCCTCGGCTA CCTCGCCAAC
AGCAAAGACA TCAAGATCTT CGCCTTCACC GACCCGGTGA CCGACCCGGC CGCACCGCAG
ACCGACGGGC TCGTCGTCAA GCCCGACAGC CCGGTCAAGA GCGTCAAGGA CCTGGCCGGC
AAGCAGGTCG CGGTCAACAA GGGCGGGCGC GGGGAGTATC TGCTGCTGCT GGCCCTGCAG
GAGGCGGGGG TCCCCGCCGA CCAGGTCAAG CGGGTCTACC TCAACCCCGA TCAGGGCGCC
TCGGCCTTCG CCACCGGCAA GGTGGACGCC TGGTGGGCGA TCGTCCGGGC CTATCCGGAG
GTGGTCGCCA AGGGGGCGAG GGTCCTCGTG CACGGCCGGG ACCTGCCGGA CAAGGACCTC
AACATGCAGG CCGCCCGGGT GGAACTGCTG AAGGAGCACC CCGAGGTGGT CCGCGTCTAC
TTCAAGGTCC TGCAGGAGCT CACCGCCGAG GCCAGGCAGA ACCCGGAGAG GTTCCAGAAC
GTCTTCCTCA CCCAGGGGCC GACCGCCGTC TCCGGGCCGC GTCTGGCCGA GGAGGTCGCC
AAGGCCAGGT ACGCCAACGT GCCCCGCTTC GCCACCGCCG CCGACGGCGC GTTCGTGACC
GACGTGGCCG GGATCTTCCA GAAGTACGGC GTGCTGCCGG GCACGGTGAA TCCCGGCGAC
GTCATCCTCG ACCTGAAGCC GGCGGCATGA
 
Protein sequence
MWTSRRRTRA AVAVAALSVA ALTAACGGAA TGTGKTTTAA AAAGSGGGGA VLKIKDPGNA 
GPLAVAKKEG ILEKRLAEIG AKVEWGGSYA SFTATIDAVR SGSINVLEGA ISPVLGYLAN
SKDIKIFAFT DPVTDPAAPQ TDGLVVKPDS PVKSVKDLAG KQVAVNKGGR GEYLLLLALQ
EAGVPADQVK RVYLNPDQGA SAFATGKVDA WWAIVRAYPE VVAKGARVLV HGRDLPDKDL
NMQAARVELL KEHPEVVRVY FKVLQELTAE ARQNPERFQN VFLTQGPTAV SGPRLAEEVA
KARYANVPRF ATAADGAFVT DVAGIFQKYG VLPGTVNPGD VILDLKPAA