| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_7700 |
|---|
| Symbol | |
|---|
| ID | 8671022 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 8501289 |
|---|
| End bp | 8503292 |
|---|
| Gene Length | 2004 bp |
|---|
| Protein Length | 667 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | Beta-galactosidase |
|---|
| Protein accession | YP_003343114 |
|---|
| Protein GI | 271968918 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0520455 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.819106 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGTCTGA CCAGGGTTTC CGGTCTGCTG TTCGGTGGTG ACTACAACCC CGAGCAGTGG
CCGGAGCACG TCTGGGACGA GGACGTCAGG CTGATGTCCG AAGCCGGGGT CACCATGGCG
ACCGTCGCGG TCTTCTCCTG GTCCCGTCTC GAACCGCGCC CGGGGGAGTA CGACTTCGGC
TGGCTGGACC GGGTCCTGGA CCTCCTCCAC GAGCACGGCG TCGCCGCCGA CCTGGCCACC
GCCACCGCCA CCCCGCCGCC CTGGCTGGTG CGCGAGCACC CGGAGGTGCT CCCGGTGGAC
GCCGCGGGGA CCCGCCTCGA CTTCGGCTCC CGCCAGAGCT ACTGCCCCAG CTCGCCGGTC
TTCCGCGAGG CCACGGTACG GCTGGCGCGG ACGATGGCCG AGCGCTACGC CGGCCACCCG
GCGCTGGCCA TGTGGCACAT CGGCAACGAG TACGCCGACC ACACCCTCGA ATGCTTCTGC
GAGGAGTCCG CCCGCCACTT CCGGCGCTGG CTGCGGGACC GCCACGGGTC GGTCGACGGC
CTGAACGCCG CCTGGGGCAC CTCCTGCTGG GGTCAGCACT ACACCGCGTT CGACCAGGTC
AACCCGCCGC GCAAGGCGCC GGGCCCGGTG AACCCCGCCC AGGTCCTCGA CTGGCGCCGC
TTCAGCTCCG ACGCGCTGCT GGAGTGCTTC GAGCTGGAGA AGGCCGTGCT GCGCGAGGTC
ACCCCGGACG TCCCGGTGAC CACCAACTTC ATGAGCATCC TGCACGGCCT GGACTACTGG
AAGTGGGCCG CGGCCGAGGA CGTCGTCAGC GACGACGCCT ACCCCGACCC TGCCGACCCC
TCCTCGCACG TGGCCGTCGC GCTCAGCTAC GACCTGATGC GCTCGCTGAA GCAGCGGCCG
TGGATCCTGC TGGAGCAGGC GTCGAGCGCG GTGAGCTGGC GCGAGGTCAA CGCTCCCAAA
CCGCCGGGGA TGATGCGCCT GCACAGCCTC CAGGCGCTGG CCCACGGCGC GGACGGCGCG
ATGTTCTTCC AGTGGCGGCA GGCCAAGTAC GGTCCGGAGA AGTTCCACTC CGCGCTGCTC
CCGCACGGCG GCACCGCCTC GCGCGGCTGG CAGGACACGG TACGGCTCGG CGCCGACCTC
AGGCGTCTCG CCGAGATCGC CGGGTCCGGG ACGCACGCCG ACGTCGCGCT GGTCCTCGAC
TGGGACAGCT GGTGGGGCCT GGAGGCTCCC GAGTCGATGC CGTCCGACCG GCTCAGGCTC
AAGGAGCTCC TGCAGGCCTG GTACGCGCCG ATGCACGCCC GCGGCATCGC GGTGGACCTC
GTCCCGGCGG GCCGCGACCT GTCCGGCTAC CGCGTGGTGA TCGCCCCCAA CCTCTACATG
TGCACCGAGG AGCAGGCCGG TCACCTGGCC GCCTTCGACG GGCACCTCGT CGTCGGCCCG
TTCAGCGGCG TCGTCGACCC GGCCGACCAG GTCCACGACG GCGGCGCCCC CGGCCCGCTG
CGCGAGCTGC TCGGCCTGAC GGTGGACGAG TTCTGGCCGC TCCCCGACGG CCTGACCCAG
CGGGTACGGC TCGCGCCGGG GCTGCGGGGG GACGGGCCGC CGGCCGTACC GGCGCGGACC
TGGGCCGAAT GGCTCCGCGT CGAGGACGCC GAGGTGCTCG CCCGTTACGA GGGCGGCGAC
CTGGACGGGC AGGCGGCGAT CACCCGGCGC GGGAACGCCA CCTACCTGAG CTGCCTGCTC
GACGACGTCA CCCCCGTCCT GACCGAGGTC CTGGCGGCCG CGGGCGTCCG GCCGGTGGCC
GACGTGCCCG AGGGCGTGGA GGCCACCCGC CGGGGCCGCT ACCTCTTCCT GCTCAACCAC
GCGACGACCC CCGCCCGGGT GGACCTCCGG GAGCCGGGGA CCGACCTGCT CACCGGCCGC
GACCTGCGGG GCCGGATCGA CATCCCGCCC CGCGACGCCG TGGTGCTCCG CACCGGAGCC
GAGCCAACCG AAGGAGAACG GTGA
|
|---|
| Protein sequence | MGLTRVSGLL FGGDYNPEQW PEHVWDEDVR LMSEAGVTMA TVAVFSWSRL EPRPGEYDFG
WLDRVLDLLH EHGVAADLAT ATATPPPWLV REHPEVLPVD AAGTRLDFGS RQSYCPSSPV
FREATVRLAR TMAERYAGHP ALAMWHIGNE YADHTLECFC EESARHFRRW LRDRHGSVDG
LNAAWGTSCW GQHYTAFDQV NPPRKAPGPV NPAQVLDWRR FSSDALLECF ELEKAVLREV
TPDVPVTTNF MSILHGLDYW KWAAAEDVVS DDAYPDPADP SSHVAVALSY DLMRSLKQRP
WILLEQASSA VSWREVNAPK PPGMMRLHSL QALAHGADGA MFFQWRQAKY GPEKFHSALL
PHGGTASRGW QDTVRLGADL RRLAEIAGSG THADVALVLD WDSWWGLEAP ESMPSDRLRL
KELLQAWYAP MHARGIAVDL VPAGRDLSGY RVVIAPNLYM CTEEQAGHLA AFDGHLVVGP
FSGVVDPADQ VHDGGAPGPL RELLGLTVDE FWPLPDGLTQ RVRLAPGLRG DGPPAVPART
WAEWLRVEDA EVLARYEGGD LDGQAAITRR GNATYLSCLL DDVTPVLTEV LAAAGVRPVA
DVPEGVEATR RGRYLFLLNH ATTPARVDLR EPGTDLLTGR DLRGRIDIPP RDAVVLRTGA
EPTEGER
|
|---|
| |