Gene Sros_7234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_7234 
Symbol 
ID8670546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp7985267 
End bp7986016 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content71% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003342667 
Protein GI271968471 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.163759 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACACAG GCAAGGCAGG ACCGGGAACA CGCCGATCAG GCGCGGCAGG AGAGGTGTGG 
CTGCGGCCGT CCGCGCGGAG GGGACGCGGC GCCCCGCCGC TCAGCCGGGA CCGGATCGTC
GAAGAGGCCG TGGCCCTCCT GGACGCCGAA GGCGCCGACC GGCTGACCAT GCGGCGCCTG
GCCGAACGGC TCGACACCGG CTCCACCACG CTGTACTGGC ATGTGAAGAC CAAGGACGAC
GTGCTTGACC TCGCTCTGGA CGCGATCTTC GCCGAGGTCG GGATTCCACC GAAGGGCGGC
CAGGGGTGGC GTGCCGGCAT CACCGTGCTG ATCAACGGAT GGCGCGCGGT CCTGCTGAGG
CATCCCTGGT CGGCGGCGCT ACTGAGCCGT CCGATGCTGG GCCCCAACGT GCTGGCCCGC
AGCGAGTTCC TGTACGCGAC CCTCCTGGAG GCCGGGGTCG TCGAACCCCA CCTCACCGCC
GCGGCGTACG GGCTGTCCAA CTACGTCATC GGCTCCGGGT TGATGCAGGC CACCTGGCCG
ACCAGCGCGG AGCAGGACGT GCGGAGGGCG GCCCGGGAAC ATCTGCGCGC CAATCGGGAG
CGCTACCCGG CCCTCGCCAC CTACGGCCCT CTTGTCGCGG AAGGTGATTG GGACGCCGGC
TTCGCTCTCG GCCTGACCTG GCTTCTCGAC GGTATCCAGG CCGGTATCGC CGGTGCCGGT
GACGCCGCCG GTGGTGCGGT GCGAGCGTGA
 
Protein sequence
MDTGKAGPGT RRSGAAGEVW LRPSARRGRG APPLSRDRIV EEAVALLDAE GADRLTMRRL 
AERLDTGSTT LYWHVKTKDD VLDLALDAIF AEVGIPPKGG QGWRAGITVL INGWRAVLLR
HPWSAALLSR PMLGPNVLAR SEFLYATLLE AGVVEPHLTA AAYGLSNYVI GSGLMQATWP
TSAEQDVRRA AREHLRANRE RYPALATYGP LVAEGDWDAG FALGLTWLLD GIQAGIAGAG
DAAGGAVRA