| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_7190 |
|---|
| Symbol | |
|---|
| ID | 8670501 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 7936033 |
|---|
| End bp | 7938060 |
|---|
| Gene Length | 2028 bp |
|---|
| Protein Length | 675 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | WD40 repeat-domain-containing protein-like protein |
|---|
| Protein accession | YP_003342624 |
|---|
| Protein GI | 271968428 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0635785 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGGGC GGTATGAGCT GCTGGAGCCG TTGGGGCGCG GTGGCATGGG GGTGGTGTAC
CGGGCGCGTG ACCGGGAGCT GGAGCGGATC GTGGCGGTCA AGGTGCTGCC CGCGCAGATG
CTGCGCGATG AGGACTTCCG GGCCCGGTTC CGCCGGGAGG CGCGGGCGGC GGCGGGCTTG
TCGCATCCCC ACATCGCGAC CGTCTACGAC ATCGGTGAGG ACATCGGTAA CGGGGATCCA
GTTCCGTATC TGGTGATGGA GCTGGTGGAG GGCGGAACCC TGGCCGATCT GCTGCGCCAG
GCGCAGCCGA CCCCGAACGA GGCCGGGCAG ATCGTGGCGG CGGTCCTGGA GGCGTTGGAG
CACAGTCACG GGCGGGAGAT CGTGCACCGC GACATCAAAC CCGCCAACAT CATGGTCCAC
CGCGCCGGCG GCCGGGTGCG GGTGAAAGTG ATGGACTTCG GGATCGCCAA GCTCATGTCG
GAGACGGCCA CCCGACTGAC CGCCACCGGA ATGCGGATCG GCACCCCGTC CTACATGTCG
CCCGAGCAGG CCGACGGCAA GCCCGCCGAC GCCCGCTCGG ATCTGTACTC CACCGGATGC
GTGCTGTATG AGATGCTCAC CGGTCGGCCG CCCTTCACCG GGGACTCGCC CACCGCCGTG
CTCTTCCAGC ACATGCACAA GACCCCGCAG CCGCCCTCAC AACTGAGCCC GGCCCTGGCT
CCCCTCTGGG ACCAGATACT GGCGACCGCG CTGGCCAAAG ACCCCCAACA GCGCCACCGG
GATGCCGCGG CGATGCGGCA GGCCATCGAA ACCGGCTTAG CCGCCCCTAC CGCCCAGGCG
CCTGCGCCGG TCCCGCCCTC CGCGTCCGCA CCGACTGCCC GGCTTGACAC CCCCCTACCT
ATCGAACCGG CGCCCACCGA ACCGGCACCC CACGCGTCGG CCCTCCACGC ACCCGGTTCT
TCCGGTCTCG GGGATCGGTC CGCGCCTGCA TCCGCAACGC GAGATCACGT CGCTGCCGTG
CCGCACCGGG TCCTGTCCCG CCGCCGCCTG CTCACCGGGC TGGGCGCCGC AGGCCTGGCC
GCCGCCCTGC CGGCCGCCTA CTACACCTTC ACCCGGGAAG ACACCGCCAC CCTCCGCGGC
CAGCCCCTCA CCGGCCACAC CGGCGTCGCG GTCTCCGCGG TGGCGTTCAG CCCGGACGGC
AAGATCCTGG CCGCTGACGA TGGCTACACC GTGCGGTTGT GGGACGTGGC CACCCGCGCC
CTCCTCGGCA CGCCCCTCAC CGGCCACACC AGCTGGGTCT CCGCGGTGGC GTTCAGCCCG
GACGGCAAGA TTTTGGCCAG CGGCAGCTAT GACGACACCG TGCGGTTGTG GGACGTGGCC
ACCAACACCC CCATCGGCCG CCCCCTCGCC GGCCGCAACA ACCCGACGGG CGCTGTCTCC
GCGGTGGCGT TCAGCCCGGA CGGCAAGATC CTGGCCACCG ATGACGACGA CGCCGTGCGG
TTGTGGGACG TGGTCACCCG CACCCCCGTC GGCCGTCCCC TCACCGGCTA CACCGACAGC
CTCCAGTCGG TGGCGTTCAG CCCGGACGGC AAGATCCTGG CCACCGATGA CGACGACGCC
GTGCGGTTGT GGGACGTGGT CACCCGCACC GCCATCGGCC GTCCCCTCAC CGGCCACACC
AGCTGGATCG CCGCGGTGGC GTTCAGCCCG GACGGCAAGA TCCTGGCCAC CGGTAGCACT
GACGACACCG TGCGGTTGTG GGACGTGGCC ACCCGCACCC CCGTCGGCCG TCCCCTCACC
GGCCACACCG ACAGCCTCCA GTCGGTGGCG TTCAGCCCGG ACGGCAAGAT CCTGGCCACC
GGCAGCGATG ACGAGACCGT GCGGTTGTGG GACGTGGCCA CGCGCACCCC CGTCGGCCGT
CCCCTCACCG GCCACACCGA CAGCCTCCAG TCGGTGGCGT TCAGCCCGGA CGGCAAGATC
CTGGCCACCG GCAGCGATGA CGGCACCGTG CGGTTGTGGC AACTGTGA
|
|---|
| Protein sequence | MSGRYELLEP LGRGGMGVVY RARDRELERI VAVKVLPAQM LRDEDFRARF RREARAAAGL
SHPHIATVYD IGEDIGNGDP VPYLVMELVE GGTLADLLRQ AQPTPNEAGQ IVAAVLEALE
HSHGREIVHR DIKPANIMVH RAGGRVRVKV MDFGIAKLMS ETATRLTATG MRIGTPSYMS
PEQADGKPAD ARSDLYSTGC VLYEMLTGRP PFTGDSPTAV LFQHMHKTPQ PPSQLSPALA
PLWDQILATA LAKDPQQRHR DAAAMRQAIE TGLAAPTAQA PAPVPPSASA PTARLDTPLP
IEPAPTEPAP HASALHAPGS SGLGDRSAPA SATRDHVAAV PHRVLSRRRL LTGLGAAGLA
AALPAAYYTF TREDTATLRG QPLTGHTGVA VSAVAFSPDG KILAADDGYT VRLWDVATRA
LLGTPLTGHT SWVSAVAFSP DGKILASGSY DDTVRLWDVA TNTPIGRPLA GRNNPTGAVS
AVAFSPDGKI LATDDDDAVR LWDVVTRTPV GRPLTGYTDS LQSVAFSPDG KILATDDDDA
VRLWDVVTRT AIGRPLTGHT SWIAAVAFSP DGKILATGST DDTVRLWDVA TRTPVGRPLT
GHTDSLQSVA FSPDGKILAT GSDDETVRLW DVATRTPVGR PLTGHTDSLQ SVAFSPDGKI
LATGSDDGTV RLWQL
|
|---|
| |