| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_6846 |
|---|
| Symbol | |
|---|
| ID | 8670156 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 7542870 |
|---|
| End bp | 7545437 |
|---|
| Gene Length | 2568 bp |
|---|
| Protein Length | 855 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | Chitinase |
|---|
| Protein accession | YP_003342295 |
|---|
| Protein GI | 271968099 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.403057 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTCAC GTCTACGCGC CGGCCTCGCG GCGGCCGGCG CGTCACTCGC CCTGATCGCA
GGCGCGCTCG CCGGCACGGC CGCCGCCGCG GCCGACGACG AGTCCTGCCG CCCGGACGGC
CTCTACACCA CCCCGGGCCT CAGCGTGCCC TTCTGCCAGG TCTACGACGA GGCCGGCCGG
GAGAAGATGG GCGCCGGCCA CCCGCGCCGC ATCATCGGCT ACTTCACCGG GTGGCGGACC
GGCAAGAACG GCCAGCCGTC CTACCTGGCC AAGGACATCC CGTGGGGCAA GATCACCCAC
ATCAACTACG CGTTCGCGCA CGTCGGCCCG GACAACAGGA TCTCGGTCGG CACCGACGGC
CCGGACAACG CGGCCACCGG CATGGAATGG CCGGGGATCG ACACGCTCGA CCCCGCCCTG
CCGTACAAGG GCCACTTCAA CCTGCTGAAC AAGTACAAGA AGGCCAACCC CGACGCCAAG
ACGCTGATCA GCGTCGGCGG CTGGGCCGAG ACCGGCGGCT ACTTCGACGC CTCCGGCGCG
CGCAAGCCCT CCGGCGGCTT CTACACGATG ACCACCAACG CCGACGGCTC CGCCAACACG
GCCGGGATCA ACGCCTTCGC CGACTCCTCG GTGGAGTTCG TCAGGAAGTA CGGCTTCAAC
GGCGTCGACC TCGACTACGA GTACCCGACC TCGATGAAGG ACGCGGGCCA CCCGCTGGAC
TGGCAGGTCG CCAACGCCCG CCGCGCGTCG CTGATGAAGA ACTACGCGGT CCTGATGAAG
ACCATGCGCG ACAAGCTCAA CGCCGCCTCG GTCGCCGACG GCAAGTACTA CATGCTGACC
ATCGCCGCCC CGTCGTCCGG CTACCTGCTG CGCGGCATGG AGACCTTCCA GGTCACCCAG
TACCTGGACT ACGTCAACAT CATGTCCTAC GACCTGCACG GCGCGTGGAA CGAGTTCGTC
GGCCCCAACG CCGCGCTCTA CGACGACGGC AAGGACGCCG AGCTCGCCAA GTGGAACGTC
TACAACACCG AGGCGTACGG CGGGCTCGGC TACCTGAACA CCGACTGGGC CTACCACTAC
TTCCGCGGCG CGATGCAGGC CGGCCGGATC AACATCGGCG TGCCGTACTA CACCCGCGGC
TGGCGCAACG TCACCGGCGG CGTCAACGGC CTGTGGGGCA CGTCCAAGAG CACCGGCGGC
TGCCCCACCG GGCTGACCTC CTGCGGTGAC GGCGCTCGCG GCATCGACAA CCTCTGGCAC
GACGAGGAGA ACAACACCGA GGTCAGCGGC GGCGGCAACC CGCTGTGGCA CGCCAAGAAC
CTCCAGGACG GCCGCGTCGG CTCCTACGGC CCCGCCTACG GCCTGGACCC GGCCGACCCC
GAGGACAGGC TGACCGGCAC CTACACCCGC AACTACGATT CCACCCTCGT CGCGCCGTGG
CTGTGGAACT CCACCAAGAA GGTCTTCCTG TCCACCGAGG ACGACCAGTC CATCGGCGTC
AAGACCGACT ACGTCAAGGA CCGGGGCATC GGCGGCCTGA TGATCTGGGA GCTCGCCGGC
GACTACGGAT GGGACGCGCC CAAGGGCGAG TGGTTCATGG GCAACACCCT CACCAACCAG
ATGTACGACG CGCTCAAGAC CGCCACGCCG TACGGCGCGA CCCGCGCCAA GGTGGCCGTG
CCGAACGAGA AGCTCGACGT GGGCGTGGAG ATCGGCGGCT TCCCGGTCGG TGACAGCAAC
TATCCGATCA CCGGCAAGCT GAAGATCACG AACAGGTCGG CGACGACGAT CCCCGGCGGC
GCGGAGTTCC AGTGGGACTA CGCCAGCTCG GCCCCGAAGA ACGCCAAGGA CCAGTCCGGC
TTCGGCGTCA CCGTGATCAG CAGCGAGCAC GGCGCGGGCA ACAACATCGG CGGCCTGAAG
GGCGACTTCA ACCGGATCTC CTTCAAGCTG CGGGCCAACG AGCCGCTGGC CCCCGGCGCC
TCGCTGAACA TGGACTACGT CTACTACCTG CCCGCCCCGG CGCCGGCCAA CTTCACCGTG
AGCTTCGGCG GCAGGACCTA CGGTCTGACG GCCGACCACG CCCGGGGCGG CGTGATCGTC
AACCCGACCC CGACGACCGG CCCGACCGGC GGCCCGGGCG GCGACTGCTC CGCCCCCGCC
TGGTCGGCCA CCCAGGTCTA CACCGGCGGC AACAAGGTCT CCTACAAGGG CAGGCAGTGG
GAGGCCAAAT GGTGGACCCA GAACAACGAG CCCGGCACCA ACGACGTCTG GAAGGACCTC
GGGGCCTGCG CCACCCCCTC CCCCACCGTG ACCCCGACGC CCACCGCGAC CCCGACCGTC
ACACCGACCG CCACGCCGAC GCCCACCCCG ACCCCGACCC CGACCGTCAC GCCGACGCCG
ACGGTCACCC CCACCGGCGC CTATCCGGCC TGGAAGGCGG GCACGGCCTA CACCACCGGC
ACCCGGGTCT CCCACTCCGG CGCCGACTAC GAGTGCCGCC AGCCCCACAC CGCCTCCGCG
GGCTGGGAGC CCTCGAACGT CCCGGCCCTC TGGCTGCGCC TGAGCTGA
|
|---|
| Protein sequence | MSSRLRAGLA AAGASLALIA GALAGTAAAA ADDESCRPDG LYTTPGLSVP FCQVYDEAGR
EKMGAGHPRR IIGYFTGWRT GKNGQPSYLA KDIPWGKITH INYAFAHVGP DNRISVGTDG
PDNAATGMEW PGIDTLDPAL PYKGHFNLLN KYKKANPDAK TLISVGGWAE TGGYFDASGA
RKPSGGFYTM TTNADGSANT AGINAFADSS VEFVRKYGFN GVDLDYEYPT SMKDAGHPLD
WQVANARRAS LMKNYAVLMK TMRDKLNAAS VADGKYYMLT IAAPSSGYLL RGMETFQVTQ
YLDYVNIMSY DLHGAWNEFV GPNAALYDDG KDAELAKWNV YNTEAYGGLG YLNTDWAYHY
FRGAMQAGRI NIGVPYYTRG WRNVTGGVNG LWGTSKSTGG CPTGLTSCGD GARGIDNLWH
DEENNTEVSG GGNPLWHAKN LQDGRVGSYG PAYGLDPADP EDRLTGTYTR NYDSTLVAPW
LWNSTKKVFL STEDDQSIGV KTDYVKDRGI GGLMIWELAG DYGWDAPKGE WFMGNTLTNQ
MYDALKTATP YGATRAKVAV PNEKLDVGVE IGGFPVGDSN YPITGKLKIT NRSATTIPGG
AEFQWDYASS APKNAKDQSG FGVTVISSEH GAGNNIGGLK GDFNRISFKL RANEPLAPGA
SLNMDYVYYL PAPAPANFTV SFGGRTYGLT ADHARGGVIV NPTPTTGPTG GPGGDCSAPA
WSATQVYTGG NKVSYKGRQW EAKWWTQNNE PGTNDVWKDL GACATPSPTV TPTPTATPTV
TPTATPTPTP TPTPTVTPTP TVTPTGAYPA WKAGTAYTTG TRVSHSGADY ECRQPHTASA
GWEPSNVPAL WLRLS
|
|---|
| |