Gene Sros_6610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6610 
Symbol 
ID8669919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp7277205 
End bp7278347 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content71% 
IMG OID 
Productvanillate demethylase oxygenase subunit 
Protein accessionYP_003342065 
Protein GI271967869 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.581564 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.184804 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAGA ACTTCTGGTA CGCGGTGGAG TTCGGCCACG CGGTCGGCCG CCGCCCCCGC 
AAGGTCACCT GCCTCGGGCA GGACTTCGTG ATCTGGCGCC GCCGCGACGG CCGGATCGCG
TGCCTGTCCG ATCTGTGCGT GCACCGGGGA GGCGCGCTGT CGATGGGCAC GCTGGCCGGC
GACGACTCCA TCGCCTGCCC CTACCACGGC TGGGAGTACG GACCGGACGG CGGGTGCGTG
AAGATCCCGG CCAACCCGCC GGGCCGGGGC ATCCCCTCCA AGGCCCGGGT CGACGCCTAC
CCGGTGATCG AGAGGTACGG GATGGTCTGG GCCTTCCTCG GCGACCTGCC CGAGGAGGAG
CGGCCGCCGA TCCCGCACAT CCCCCAGCAC GAGGACCCGG CGTTCCGGGC GGTCTACTGG
GAGACCACGG TCGACGCCAA CTACGAGCGC ACGCTGGAGA ACGTGGTCGA CGCGGCGCAC
ACCCCGTTCG TGCACGGCAC CGCGTTCGGC AACCCGGACA GGCCGGAGAT CCCCGACTAC
GAGATCACCG GCGACGACTG GCACGCCGAG GCCGACATCC TGCTCAGCCC CCCGCTGCCG
AAAGGCCTGT GGGGAGCACT GGCCCGGCGC AGGCCCCGCG CGGAGCACGT CGTGGTCTCC
AACGGCTGGT ACCTGCCCAA CATCGTCAAG CTGCACGTAC GGCTGCCCTT CGGCGACCTC
GTCCTCTACG ACCACAACAT CCCGCTCGGG CAGAACCGCA CGCTGGTGAA GATCGTCGGC
TACCGCAACT TCTTCACCGG GAGGTGGGCG GACGGCAACG CGGTCAAACG CATCGAGAAG
ATCTTCGAGC AGGACCGCCC CGTCGTCGAG AACCAGCGGC CCGAGCTGCT GCCCTTCGAC
CTCTCGGCCG AGCTGCACAT CCGCAGCGAC GCCCTCCAGG TCGCCTACCG GCGACGCCGC
CGGCAGCTCA TGGACCGGGG CTGGTGGGTC GGCGGCGACG ACATCGTCAC CGGTGACGTG
CCACGTCGAG AGGCCACCGT CATCCCCTCG CCCGCCCGCC GCGACAACCC CGACCTCGCC
CGCGCCTGGG TCCACCGATC CCGAGGAGAG ACCGTCAATG AGCCTGCCCG CAGCGCTGAG
TGA
 
Protein sequence
MLKNFWYAVE FGHAVGRRPR KVTCLGQDFV IWRRRDGRIA CLSDLCVHRG GALSMGTLAG 
DDSIACPYHG WEYGPDGGCV KIPANPPGRG IPSKARVDAY PVIERYGMVW AFLGDLPEEE
RPPIPHIPQH EDPAFRAVYW ETTVDANYER TLENVVDAAH TPFVHGTAFG NPDRPEIPDY
EITGDDWHAE ADILLSPPLP KGLWGALARR RPRAEHVVVS NGWYLPNIVK LHVRLPFGDL
VLYDHNIPLG QNRTLVKIVG YRNFFTGRWA DGNAVKRIEK IFEQDRPVVE NQRPELLPFD
LSAELHIRSD ALQVAYRRRR RQLMDRGWWV GGDDIVTGDV PRREATVIPS PARRDNPDLA
RAWVHRSRGE TVNEPARSAE