Gene Sros_6584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6584 
Symbol 
ID8669893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp7246675 
End bp7247988 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content68% 
IMG OID 
ProductABC transporter sugar binding protein 
Protein accessionYP_003342039 
Protein GI271967843 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAACC GTCGCGGGCT TCTCGCCCTT GCCCTTACCG GCATGGCCGC CCTGACCGCC 
GCTGCCTGCG GAAGCAGCCC GGAACAGCGG TCCTCCGGCC CCGTGAAGAT CACCGTCTGG
TCCTGGAAGC CCGCCTCGGA CGGCCTGGCC GCGATCGCCA AGGACTTCGA GAAGGCGAAC
CCGAACATCA AGATCGACGT CCAGGTGGTC GGCAACCCGA CGATCTGGGA AAAGATCACC
ATCGGCATGG CGGCGGGCGG CAAGGGTCTG GGCGACATCC TGCACATCGG CATCGACTAC
CTGCCCAGCT ACGTGGACAA GTTCCCCGGC GGTCTGGCCG ACCTGAACAA GCTGGGCGCC
GGCAAGTACA AGGACGCCTT CGCCAAGGGG CTGTGGCCCA CGGTCACCGG CAAGGACGGC
GGCGTCTACG CGATGCCGTG GGAGGTCAAC CCGATCGGCT TCTTCTACCG CTCCGACCTC
TTCGAGAAGG CCGGGATCGA CCCGGCGGCG ATCCAGACCT GGGACGACGC CATCGAGGCG
GGCAAGAAGC TCAAGGAGAA GACCGGGGCG TCCCTCATCG GCCTGAACAA GCCTGGCGCC
GGCAGCGCGG ACATGGACCT GTACCAGTCG CTCCTGCAGC AGCAGGGCGC GTTCTACTTC
AACCAGCAGG GCGATGTCAC GCTCGGCTCG GCGCCCGCCG TACAGGCCAT GACCCTGATC
AAGAAGATGA ACGACGCCGG GATCGTCGCC GACACCTCCG GCGAGGGCAC CCAGAAGAAG
CTGATCACCG GCGGCAAGCT GGCCGTACTG CCGTGGGCGG CCTGGGCGGT GAACTACATC
CCGGAGATGC GCCCGGAGCA GAAGGGCCTG TGGCGGGTGA TGCAGCCGCC GGCGGTCACC
GCGGGCGGCA AGCGGACCGC GATCGTCAAC TCCACCCACC TGGCGATCTC CGGCACCAGC
CCGCACCAGG CCGAGGCGTT CAAGTTCATC GAGTACGCGC TGACCAAGCC CGAGGCCATC
AACAAGGTGT TCAAGGAAGG CGGCGTCTTC CCGGCGCTGA CCGCCGCCTA CGCCGACCCG
ATGTTCTCCG CCCCGACGGA CTACTACGGC GGGCAGCCCA CGCTCAAGAC CTTCGTGGAC
TCCCTGACCG AGGGCGCCGA CGCCACCTAC TACTCCAGTG ACTACGCGCG GGCACTGAAG
ATCGCCAGCG ACGCCCAGAC GCAGGTCCTG CTCAAGGGCG CCGATCCGGC GGCCGCGCTG
ACCCAGGCGG CCCAGCAGCT CGCCCAGCAG ACCGGCAGGA AGCTCGCGGG ATGA
 
Protein sequence
MMNRRGLLAL ALTGMAALTA AACGSSPEQR SSGPVKITVW SWKPASDGLA AIAKDFEKAN 
PNIKIDVQVV GNPTIWEKIT IGMAAGGKGL GDILHIGIDY LPSYVDKFPG GLADLNKLGA
GKYKDAFAKG LWPTVTGKDG GVYAMPWEVN PIGFFYRSDL FEKAGIDPAA IQTWDDAIEA
GKKLKEKTGA SLIGLNKPGA GSADMDLYQS LLQQQGAFYF NQQGDVTLGS APAVQAMTLI
KKMNDAGIVA DTSGEGTQKK LITGGKLAVL PWAAWAVNYI PEMRPEQKGL WRVMQPPAVT
AGGKRTAIVN STHLAISGTS PHQAEAFKFI EYALTKPEAI NKVFKEGGVF PALTAAYADP
MFSAPTDYYG GQPTLKTFVD SLTEGADATY YSSDYARALK IASDAQTQVL LKGADPAAAL
TQAAQQLAQQ TGRKLAG