Gene Sros_6577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6577 
Symbol 
ID8669886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp7236950 
End bp7237450 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content73% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003342032 
Protein GI271967836 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.153713 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0635785 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGACC TTTCCGTCTC CACTCCTCCC TCGTTCGCCG AGCTGTTCGC GGCGCACCAT 
CTGTCGATGG TGCGGCTGGC CGGGCTGCTC GGCGCCGACG ACCCGGAGGA CATAGCCCAG
GAGGCGTTCG CCCGCCTCCA CGCACGGTGG GCGCGGCTGC GCGACGGCGG AGCGGCCGTC
GCCTATGTGC GGTCCACCGT GTGCAACCTG ACCCGCAACC GGCTGCGCCA TCTGCGGCTG
GTACGGCTGC GCCCGCTCGA CCCCCCACCG GCCGCGCACA GCAGCGAGCA CGTGGTCATC
GTCGCCGAGA AGCACCGGGA GCTGCTGTCC GCCGTCGACC GCCTCCCCCG CCGCCAGCGC
GAGGCCCTCG TCCTGCGCTA CTGGCTGGAC CTGTCCGAAC GGGAGATCGC CGACGCGATG
GGCGTCTCCC CCGGCTCCGT CAAGACACAC ACGAGCCGGG GCCTGTCCGC CCTCGGCAGG
GCCCTCCGGG AGGAATCGTG A
 
Protein sequence
MIDLSVSTPP SFAELFAAHH LSMVRLAGLL GADDPEDIAQ EAFARLHARW ARLRDGGAAV 
AYVRSTVCNL TRNRLRHLRL VRLRPLDPPP AAHSSEHVVI VAEKHRELLS AVDRLPRRQR
EALVLRYWLD LSEREIADAM GVSPGSVKTH TSRGLSALGR ALREES