Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_6552 |
Symbol | |
ID | 8669861 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 7191699 |
End bp | 7192829 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | transcriptional regulatory DNA-binding repressor transcription regulator protein |
Protein accession | YP_003342008 |
Protein GI | 271967812 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.245793 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000198251 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGACCGAGA CCGACAAGAC GGCCGAGGCG TCGCCGTCGC GTCCCCGCCC TCGCAGGAGC GCCGCGCTCG GCGCCGAGGA CACGCGGGCC CACGGCCGTC GCCGGCTCAG CATGGTCGAC GTGGCGGCCC ACGCGGGGGT GTCCGTCGGC ACGGTCTCCA ACGTGCTCAA CCGGCCGGAG ATCGTCGCCA AGCCCACCCT CCTGCGGGTC AAGGCCGCCA TCGAGACGCT CGGCTTCGTG CCCAGCGCGC CGGCCCGGCA ACTGCGGGCG GGCACGAGCC GCTCGGTGGG CGTCGTCGTG CGCGACATCG GCAACCCGTT CTTCACCGAG GTGCTGCCCG GCATCGAGAG CCGGCTGTCG GAGGAGCAGC TCCTGCTGGT GGTGTGCAGC TCCAACGACT CGCCCGAGAA GGAAGCCCAC TACCTGCAGA CTCTGGAGCA GCACCGGGTG CCGGGCATCC TCATCACGCC GGCCGGCGAC GACATCGGCC ATCTCGTCGA CCTCCACCGG CGCGGGGTCG GGGTGGTGCT GCTCGACAGG CCCGGCGCCG ACTCGCAGCT GTGCGCCGTG GCGGTCGACA ACGTCCGCGG CGGCGAGCTC GCCGGCAACC ACCTGCTCTC GCTGGGCCAC CGGCGCATCG GCTTCCTCAA CGGGCCGCTG GTCATACGGC AGTGCAGGGA CCGGCGCGAG GGGCTGCTGC GGGCGGTCCG CAACGCCGGG CTCGTCCCCG ACGAGGTCGT CACCGAGATC ACCCTGCCCG TGCTCAACGC CGCGGGGGGT GAGGCGGGGC TGGATGAGCT GCTCGCCATG GCGGGCCCGC CGCCGACGGC GCTGTTCTGC ATGAACGACA TGGTCGCGCT GGGCGCGCTG AGAAACCTGG AGCAGCGCGG CGTCACCGTC CCCGGCGAGA TGGCCGTGGT GGGATACGAC GACGTGGAGT TCGCCGCACT GCTGTCGCCG TCGCTGACCT CGATCCGCCA GCCGAAGCAG CAGCTGGGAC GGGCCGCGGC CGAGCTCCTG CTCACCGACG CCCGGGGAGA GGCCGGCCAC TGGCACCAGG AGATCGTCTT CCAGCCCGAG CTCGTGGTGC GCGCCTCCAG CTCGGCCCCC GCCCACCCGA GCGCCGGCTG A
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Protein sequence | MTETDKTAEA SPSRPRPRRS AALGAEDTRA HGRRRLSMVD VAAHAGVSVG TVSNVLNRPE IVAKPTLLRV KAAIETLGFV PSAPARQLRA GTSRSVGVVV RDIGNPFFTE VLPGIESRLS EEQLLLVVCS SNDSPEKEAH YLQTLEQHRV PGILITPAGD DIGHLVDLHR RGVGVVLLDR PGADSQLCAV AVDNVRGGEL AGNHLLSLGH RRIGFLNGPL VIRQCRDRRE GLLRAVRNAG LVPDEVVTEI TLPVLNAAGG EAGLDELLAM AGPPPTALFC MNDMVALGAL RNLEQRGVTV PGEMAVVGYD DVEFAALLSP SLTSIRQPKQ QLGRAAAELL LTDARGEAGH WHQEIVFQPE LVVRASSSAP AHPSAG
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