| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_6516 |
|---|
| Symbol | |
|---|
| ID | 8669825 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 7151879 |
|---|
| End bp | 7153099 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | sugar ABC transporter, ATP-binding protein |
|---|
| Protein accession | YP_003341973 |
|---|
| Protein GI | 271967777 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.268585 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATCCA TCGTTCTCAG CAAAGTCGAC AAGATCTACG CAGGCGGTGT AAAAGCCGTA
GACGGTCTCG ACCTTGAGAT CAGGGACGGC GAGTTCATGG TCCTGGTCGG CCCGTCCGGT
TGTGGCAAGT CCACCGCCCT GCGCATGATC GCCGGCCTTG AGGACATCAG CGGCGGCGAG
ATCGCCATCG GTGACCGGGT GGTCAACCAC CTGCCTCCGA AGGACCGTGA CATCGCCATG
GTCTTCCAGA ACTACGCGCT CTACCCGCAC ATGACTGTCG AGGAGAACCT CGCCTTCGGT
CTGAAGCTCC GCAAGATGCC CAAGGCCGAG ATCTCCAAGC GGGTCAACGA GGCCGCCAAG
ATGCTCGGCC TGGAGCAGTA CCTCAAGCGC AAGCCGGCCG CCCTCTCCGG TGGTCAGCGC
CAGCGTGTCG CGATGGGCCG CGCCATCGTG CGTGAGCCGC AGGCCTTCCT CATGGACGAG
CCGCTGTCCA ACCTGGACGC CAAGCTCCGC GTCTCCATGC GCGCCTCCCT CAACACCCTG
CACGAGCGTC TCGGCGTGAC CACCGTCTAC GTCACCCACG ACCAGGTCGA GGCCATGACC
CTCGGCGACC GCGTCTGCGT CCTGCGCGAC GGCCTGCTCC AGCAGGTCGA CACCCCGCAG
AACCTCTTCG ACAAGCCGGT CAACCTGTTC GTCGCGGGCT TCATGGGCTC CCCGTCGATG
AACTTCGTCA ACGCCGAGCT GGTGCGCGGC GACGGCGGCG CCGCCGTCTC CTTCGCCGGC
TTCAAGCTGC CGGTGCCGAA CGAGACCTTC ACCGAGAAGC CCGGCCTCGA CCAGTGGATC
GGCAAGCAGA TCATCCTGGG CATCCGCCCG TCCGACTTCG ACGACTCCGT CGCCGCCAAC
GGCTCCGCCG GCGGCTGGAC CCGCCTGCAG GTCCGCGCGG AGGTCACCGA GGAGCTCGGC
TCCGAGATCA ACGTCCTGTT CCTGATCGAC GCCCCGCCGG TCCAGCACCA GGACACCGTC
GCCGCGGCCG ACGCCGGTGA CGACGAGGAA GCGGCCCTCC CGCTGGTCGG CGACAAGTCG
CTGTGGACCG CCCGCGTCAA CTCCCGCAGC CACGTCCGCC CCGGCCAGAA CATCGAGCTG
GTCGTGGACA CCCACAACCT GCACTTCTTC GACCCGGTCT CGGGTCTGGC GATCGGCCAC
CACGCCAACG CCCGCGTCTG A
|
|---|
| Protein sequence | MASIVLSKVD KIYAGGVKAV DGLDLEIRDG EFMVLVGPSG CGKSTALRMI AGLEDISGGE
IAIGDRVVNH LPPKDRDIAM VFQNYALYPH MTVEENLAFG LKLRKMPKAE ISKRVNEAAK
MLGLEQYLKR KPAALSGGQR QRVAMGRAIV REPQAFLMDE PLSNLDAKLR VSMRASLNTL
HERLGVTTVY VTHDQVEAMT LGDRVCVLRD GLLQQVDTPQ NLFDKPVNLF VAGFMGSPSM
NFVNAELVRG DGGAAVSFAG FKLPVPNETF TEKPGLDQWI GKQIILGIRP SDFDDSVAAN
GSAGGWTRLQ VRAEVTEELG SEINVLFLID APPVQHQDTV AAADAGDDEE AALPLVGDKS
LWTARVNSRS HVRPGQNIEL VVDTHNLHFF DPVSGLAIGH HANARV
|
|---|
| |