Gene Sros_6450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6450 
Symbol 
ID8669759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp7065080 
End bp7065646 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content73% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003341907 
Protein GI271967711 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000363867 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0147922 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACCA CACAGCGTCC CATGCGCGCC GACGCGCGCC GCAACTACGA GCGGCTGCTC 
GCCGCGGCCA GGGATGCCTT CGCCGGGCAC GGCACCGAGG CGTCGCTGGA GGACATCGCC
CGTTCGGCGG AAGTGGGCAT CGGCACCCTC TACCGGCATT TCCCCACCCG GCGCGCACTG
CTTGAGGCGG TGCTCCACGA CGGCATCGCC ACCCTCGACG CCCGGGCCCG CGAGCTGCTG
GAGTCCCCCT CCCCCGAGGA GGCCCTCCTG GAATGGCTGC GCCATCTGAT GGCGCACGCC
ACCACCTACC GGGGCCTGGC CGCGGCGCTG ATGAGCAGCA TCCACGATCC GGACTCCGAG
CTGTACGGCT CGTGCGAGAC GATGCAGACC AGCGGGGCCC GGCTGCTCGC CCACGCCCAG
AACGCGGGCG CCATCCGCCC GGACCTCACC GGCACCGACC TCGTCAAGCT GGTCAACGCG
ATCGCCTGGG CGGGCGAGCA CGGCGAGAAC GAGGCCGACC GCCTCCTCGA CCTGGTGGCC
GACGGCCTGC GGACGCGCGA TCGGTGA
 
Protein sequence
MTTTQRPMRA DARRNYERLL AAARDAFAGH GTEASLEDIA RSAEVGIGTL YRHFPTRRAL 
LEAVLHDGIA TLDARARELL ESPSPEEALL EWLRHLMAHA TTYRGLAAAL MSSIHDPDSE
LYGSCETMQT SGARLLAHAQ NAGAIRPDLT GTDLVKLVNA IAWAGEHGEN EADRLLDLVA
DGLRTRDR