Gene Sros_6413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6413 
Symbol 
ID8669722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp7022674 
End bp7024242 
Gene Length1569 bp 
Protein Length522 aa 
Translation table11 
GC content72% 
IMG OID 
ProductMethylcrotonoyl-CoA carboxylase 
Protein accessionYP_003341870 
Protein GI271967674 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0804402 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0134377 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGGCT GGCCGGTGCT GCGGAGCGCC TGCGACCCGG GTGGCGAGGG GTTCAAGGGC 
AACGCGGAGG TCAACGAGCG CCTGGCCGCG GACCTGAGAG AGCGGCTCGC GGTCGCCGGG
CTGGGCGGTC CGGAGAAGTC CCGGGCCAGA CACGTGTCGC GCGGCAAGCT GCTGCCCCGC
GACCGGGTGG ACGCCCTGCT CGACCCGGGC TCACGCTTCC TGGAGCTCTC CCAGCTCGCC
GCCACCGGGC TCTACGGCGA CGAGGCCCCC GCCGCCGGGA TCATCACCGG CGTGGGCCGC
GTCTCCGGCC GCGAATGCGT GGTCGTCGCC AACGACGCCA CCGTCAAGGG CGGCACCTAC
TACCCCGTCA CGGTCAAGAA GCACCTGCGG GCCCAGGAGG TCGCCCTCCA CAACAACCTG
CCGTGCGTCT ACCTCGTCGA CTCCGGCGGC GCGTTCCTGC CCAAGCAGGA CGAGGTCTTC
CCCGACCGCG AGCACTTCGG CCGCATCTTC TACAACCAGG CCACCATGTC GGCGCGCGGC
ATCCCGCAGA TCGCCGCGGT GCTCGGCTCC TGCACGGCGG GCGGCGCCTA CGTCCCGGCG
ATGAGCGACG AGGCGGTGAT CGTCCGCAAC CAGGGCACGA TCTTCCTCGG CGGCCCGCCG
CTGGTGAAGG CGGCGACCGG GGAGGAGGTC ACCGCCGAGG AGCTGGGCGG CGGCGACCTG
CACGCCCGGG TCAGCGGCGT CACCGACCAC CTCGCCGAGG ACGACCCGCA CGCGCTCAGG
ATCGTCCGCG ACATCGTGGC CACCCTCGCC CCGCGCCCCC CGTCCCCGTG GGAGCGCGTC
CCCGCAGAGG AGCCGGCGCA CGACCCGCGC GACCTCTACG GGATCGTCCC CGCCGACACC
CGCACGCCGT ACGACGTGCG CGAGATCATC GCCCGGGTCG TGGACGGCAG CCGGTTCCTG
GAGTTCAAGG CCGAGTACGG CGCCACGCTC GTCACCGGCT TCGCCCACAT CCACGGCCAC
CCGGTCGGGA TCATCGCCAA CAACGGCATC CTGTTCGGCG AGTCCGCGCT CAAGGGCGCG
CACTTCATCG AGCTGTGCGA CCGCCGCGCC GTGCCCCTGG TGTTCCTGCA GAACATCAGC
GGGTTCATGG TCGGCAAGGC GTACGAGGCC GCCGGCATCG CCAAGCACGG CGCCAAGATG
GTCACCGCCG TCGCCTGCGC CCGGGTGCCC AAGTTCACCG TGGTCGTCGG CGGCTCGTTC
GGCGCGGGCA ACTACGCGAT GGCCGGGCGT GCCTACTCGC CCCGGTTCCT GTGGATGTGG
CCCAACGCGC GCATCTCGGT GATGGGCGGC GAGCAGGCCG CGAACGTGCT CTCCACGGTC
GGCAACGCCG ACCCCGACGC CATCCGCAGG CAGTACGAGG ACCAGGGCAA CCCCTACTAC
TCCACCGCCC GCCTGTGGGA CGACGGCGTC ATCGACCCTC TCGACACCCG CACCGTCCTC
GGCCTGGCCC TGTCCGCCTC GGCCAACGCC CCTCTCGAAC CCGTCGGCTA CGGCGTCTTC
CGGATGTGA
 
Protein sequence
MSGWPVLRSA CDPGGEGFKG NAEVNERLAA DLRERLAVAG LGGPEKSRAR HVSRGKLLPR 
DRVDALLDPG SRFLELSQLA ATGLYGDEAP AAGIITGVGR VSGRECVVVA NDATVKGGTY
YPVTVKKHLR AQEVALHNNL PCVYLVDSGG AFLPKQDEVF PDREHFGRIF YNQATMSARG
IPQIAAVLGS CTAGGAYVPA MSDEAVIVRN QGTIFLGGPP LVKAATGEEV TAEELGGGDL
HARVSGVTDH LAEDDPHALR IVRDIVATLA PRPPSPWERV PAEEPAHDPR DLYGIVPADT
RTPYDVREII ARVVDGSRFL EFKAEYGATL VTGFAHIHGH PVGIIANNGI LFGESALKGA
HFIELCDRRA VPLVFLQNIS GFMVGKAYEA AGIAKHGAKM VTAVACARVP KFTVVVGGSF
GAGNYAMAGR AYSPRFLWMW PNARISVMGG EQAANVLSTV GNADPDAIRR QYEDQGNPYY
STARLWDDGV IDPLDTRTVL GLALSASANA PLEPVGYGVF RM