Gene Sros_6294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6294 
Symbol 
ID8669603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6904066 
End bp6904983 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content68% 
IMG OID 
Productextracellular solute-binding protein 
Protein accessionYP_003341762 
Protein GI271967566 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.102459 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.206297 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGTCCA TGAAGCGGAT GGCCGCTGTC GCCGCCGTGT CGATGGTCGG CCTCTCGGCC 
TGTGCCGGCA CGGATTCGGC CAGCCCGGCG GTGCCCGGCG AGGCCAAGGG CGGTGACCTG
TTCGCCAAGG CGCCGGTGGC GGCCGCCGCC GACATCCTGC CCGGCTCCAC GATGGAGAAG
ATCAAGCAGC GCGGCGAGCT GATCGTCGGC GGGTCGCTCG ACGCCCCGCT GCTGTCGCAG
CAGAACCCGA CGACCGGCGA GGTCGAGGGG TTCGACGCGG ACATGGGCAA GGCGCTCGCC
AAGTACATCA TCGGCGAGCC CAAGGTGAAG ATCGTCAACT CGGCGTCGGA GACCCGTGAG
GCGCTGCTGA GCAACGGCAC CGTGGACGTC GTCTTCCAGA CCTACACGAT CACGCCGGAG
CGGGCCAAGC AGGTCGCCTT CGCCGGGCCG TACTACTCCT CGGGCCTGAG CCTCGCGGTC
AGGAAGGGCA CGGCGGGCAT CGCCAAGCCT GAGGACCTGA ACGGCAAGAC CGTCATCGCC
GGGGCCAACA CCCCGGCCAT CCCGGCGATC AAGAAGCTCG CGCCGCAGGC GAAGATCGTG
ACGTTCGGCA GCGACCCCGA GTGCATGCAG GCGCTCAAGC AGGAGCGCGG CGACGTCTAC
GTCCAGGACG AGATGCTCCT GGTCGCCAAC GCCCAGAAGG ACCCCTCGGT CCAGGTCGTC
GGGCAGCCCT TCACGACCGA CCCGTACGGC ATCGGCCTCA AGCACGGTGA CGAGCAGTTC
AAGAAGTTCG TCAACGACTG GCTGAAGAAG ATCCAGGGTG ACGGCCTCTG GCAGCAGACC
TGGAAGAACT CCATCGGCAC GGTCGTGCAG GGCGAGGCGC CCACCCCGCC GCAGATCGGA
TCGGTTCCGG GCTCCTGA
 
Protein sequence
MVSMKRMAAV AAVSMVGLSA CAGTDSASPA VPGEAKGGDL FAKAPVAAAA DILPGSTMEK 
IKQRGELIVG GSLDAPLLSQ QNPTTGEVEG FDADMGKALA KYIIGEPKVK IVNSASETRE
ALLSNGTVDV VFQTYTITPE RAKQVAFAGP YYSSGLSLAV RKGTAGIAKP EDLNGKTVIA
GANTPAIPAI KKLAPQAKIV TFGSDPECMQ ALKQERGDVY VQDEMLLVAN AQKDPSVQVV
GQPFTTDPYG IGLKHGDEQF KKFVNDWLKK IQGDGLWQQT WKNSIGTVVQ GEAPTPPQIG
SVPGS