| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_6245 |
|---|
| Symbol | |
|---|
| ID | 8669550 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 6855389 |
|---|
| End bp | 6856198 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | DNA-(apurinic or apyrimidinic site) lyase |
|---|
| Protein accession | YP_003341715 |
|---|
| Protein GI | 271967519 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0854341 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGAAG GACACACCAT CCATCGCCTG GCCGCGCAGT ACCGGCAGGC GTTCGGCGGC
CGAGTGGTGC GCGCCGAGAG CCCGCAGGGG CGGTTCGCCG CCGGGGCCCA CCAGATCGAC
GGGCGGGTGC TCCGGGAGAC CGACGCGCAC GGCAAGCATC TGCTGCTCGG ATTCGACGAC
GACCGCTGGC TCCACGTGCA CCTGGGCATC TACGGCAAAA GCGCCTTCGG CCCGGCTCCG
GCGCCCGCGC CGACGGGTGC GGTACGGCTG CGCCTGAGCA ACGCGGAGGA ATACGCCGAC
CTGCGCGGGC CCAACACCTG CGAGCTGCTG GATCCGGCCG AGAAGAAGGC GCTGCACGCC
AGGCTCGGGC CGGATCCGCT GCGCGCCGAC GCCGATCCGG AGCTCGCCTG GCGGCGGATC
GGCCGCAGCC GCACCTCCAT CGGCGTCCTG CTGATGGACC AGTCGGTCGT CGCGGGGGTG
GGCAACATCT ACCGCGCCGA GGCGCTGTTC CGGGAGGGCG TCGACCCGTC CCGCCCCGGC
CGCGACCTCA CCCACGGGCA GTGGAAGGCC ATCTGGGCCG ACCTGGTGGC GCTGATGGCC
GACGGGGTGC GGGTGGGCCG GATCGACACG GTCAGGCCCG AGCACACCCC GGAGGCGATG
GGGCGTCCGC CCCGCGTCGA CGACCACGGC GGCGAGGTCT ACGTCTACCG CCGTTCGGGC
ATGCCCTGCT TCCTGTGCGG CGGCGAGGTC CGCACCGGGG TGCTCGCCGG CCGCAACCTC
TTCTGGTGCC CGGCCTGCCA GACCACGTGA
|
|---|
| Protein sequence | MPEGHTIHRL AAQYRQAFGG RVVRAESPQG RFAAGAHQID GRVLRETDAH GKHLLLGFDD
DRWLHVHLGI YGKSAFGPAP APAPTGAVRL RLSNAEEYAD LRGPNTCELL DPAEKKALHA
RLGPDPLRAD ADPELAWRRI GRSRTSIGVL LMDQSVVAGV GNIYRAEALF REGVDPSRPG
RDLTHGQWKA IWADLVALMA DGVRVGRIDT VRPEHTPEAM GRPPRVDDHG GEVYVYRRSG
MPCFLCGGEV RTGVLAGRNL FWCPACQTT
|
|---|
| |