Gene Sros_6147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6147 
Symbol 
ID8669446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6743218 
End bp6744570 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content71% 
IMG OID 
Productputative secreted protein 
Protein accessionYP_003341620 
Protein GI271967424 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0413388 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGGAT GCGGCGCGGA CGCCGAACCC GCCGTCCCCC GGGCCGCCTC CACCACGGCC 
ACCGCGCCGG CCGCGGCCGC CTCGGCGGGC GCGACGGCCT CCGGGGACGT CACGCACAGC
GCCAACGTCA CGCACGTGGC CAACGTGCCG CCGCAGGCCC CGCTCGACGG CCCCCAGGCC
TGGGGCACCG ACCTGGCCTT CCAGGGCGAC CACGCGTTCG TCGGCAACTA CGACGGCTTC
AGCGTGTTCG ACGTGTCCGA CCCTGCCAAG CCCACCGCGG TCAGCCGGGT GCTCTGCCCC
GGCGAGCAGA ACGACATCTC GGTGAGCGGG GACCTGCTGT TCCTGTCGGT CGACTCGCCG
CGCGAGGGCC CCGACTGCGC GGCCGAATCG GGCAGGAACG GCGGCAGAGG CGGCTGGGAG
GGCATCCGGA TCTTCGACAT CGCCGACAAG GCCCATCCCC GGTTCGTGTC GGCGGTCCGC
ACCGACTGCG GCTCCCACAC CCACACCCTC GTCCCGGGCA AGGACGGGAA GAAGGTCTAC
CTCTACGTCT CCTCCCCCGG CCCGGAGCCC GAGTCGACGA CCTGCCCGGC ACCGCACAAC
AAGATCTCCG TGGTCGAGGT GCCGACCGCC GATCCCGCCG GCGCCAAGGT GGTCTCGGAG
CCGGTGCTCT CCGAAGGCGA CGGTGAGGAC GGCCTGGGCG GCTGCCACGA CATCACGGCC
TACCCGGAGA AGGACCTGGC CGCCGCCGCG TGCTTCGGCG ACGGGATCCT GATGGACATC
TCCGACAGGG TGCACCCCAA GGTGCTCCAG CACGTGCGCG ACGAGGAGAA CTTCTCGATC
TGGCACTCGG CCACGTTCAA CAACGACGCC ACCAAGGTGG TCTTCGGCGA CGAGCTGGGC
GGCGGTGTCA GCGCCACCTG CGACTCCGGC ACGCCGAAGA ACCACGGGGC GGACGCCGTG
TACGACCTCA GCGAGGGCCG CGCCCTCCGG CTCCGCGGCT ACTTCAAGAT CCCCAGGGAG
CAGCAGCCCG ACGAGAACTG CGTCGCGCAC AACGGGTCTC TGCTGCCGGT TCCCGGCAAG
GACATCATGG TCCAGTCGTG GTACCAGGGC GGGGTGTCCA TCCTGGACTT CACCGACGCG
GACAACCCCC GGGAGATCGG CTTCTTCGAG CGCGGCCCCG TCGAGGGGGT CGGCGGCTCG
TGGTCGGCCT ACTACTACAA CGGCCACATC TACTCCAGCG ACATCACCAA GGGCCTGGAC
GTGCTCCGGA TCGACGACCC GCTGACCGAT CCGGCCAAGA AGGTCACGAT CAAGGAGCTG
AACGCCCAGA CCCAGGTGTC CTACCCGCGG TGA
 
Protein sequence
MAGCGADAEP AVPRAASTTA TAPAAAASAG ATASGDVTHS ANVTHVANVP PQAPLDGPQA 
WGTDLAFQGD HAFVGNYDGF SVFDVSDPAK PTAVSRVLCP GEQNDISVSG DLLFLSVDSP
REGPDCAAES GRNGGRGGWE GIRIFDIADK AHPRFVSAVR TDCGSHTHTL VPGKDGKKVY
LYVSSPGPEP ESTTCPAPHN KISVVEVPTA DPAGAKVVSE PVLSEGDGED GLGGCHDITA
YPEKDLAAAA CFGDGILMDI SDRVHPKVLQ HVRDEENFSI WHSATFNNDA TKVVFGDELG
GGVSATCDSG TPKNHGADAV YDLSEGRALR LRGYFKIPRE QQPDENCVAH NGSLLPVPGK
DIMVQSWYQG GVSILDFTDA DNPREIGFFE RGPVEGVGGS WSAYYYNGHI YSSDITKGLD
VLRIDDPLTD PAKKVTIKEL NAQTQVSYPR