| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_5988 |
|---|
| Symbol | |
|---|
| ID | 8669282 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 6562908 |
|---|
| End bp | 6563720 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | putative transcriptional regulator |
|---|
| Protein accession | YP_003341465 |
|---|
| Protein GI | 271967269 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.423891 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.331781 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAATACG TGAGCCAGAT GCCGGGCACC GAGGAGACCG CCGCCGCGCG GCCCTCCGGC
GTGTCCGCCG AGCGCAGCAC GCGTGCGCGT GTCGCCCGGC TCATTCTGGA GCACGGACCC
ATCACCGCCG CCGCCCTCGG CGAACGGCTC GGGCTCACCC CGGCCGCCGT CCGCCGCCAT
CTGGACGCAC TGCTCGCCGA AGGGATGATC GAGCCCCGTA CGGCCCGGCC CCGCGGCCAG
CGGGGGAGAG GGCGGCCGGC GAAGCTCTTC GCCATAACCG ACGCCGGGCG CAGCGCCTTC
GAGCACGCCT ACGACGGTCT CGCCGGAAAC GCGCTGCGCT TCCTCGCCGA GCGCGTGGGC
GAGGAGGCGG TGGCCGAGTT CGCCCGGTCG CAGGTGTCCG GCCTCGTCGG ACGGCTGCAG
CTGGAGATGC GCAAGGTCCC CGCCGACCAG CGGGTCCGCG TCCTGGCCGA GGCCCTGTCG
GCCGACGGTT ACGCGGCCTC GGCGAGCAAG GCCAGTCTCG GCGGCGAGCA GTTGTGCCAG
CACCACTGCC CCGTGGCGCA CGTGGCCGCG GAGTTCCCGC AGCTCTGCGA GGCCGAGACC
GAGGCGTTCG CGCAGATCCT CGGCACGCCT GTCCAGCGGC TGGCGACCAT CGCCCATGGC
GACGGGGTGT GCACCACCCA CGTGAGCCCG CACAGAGCGG CCGAGCCGGA CGCGCGGGAG
CGTGAAGCGG GACGGCGGGC ACCCGGGCGA TCGCGACCAT CCATAAGGCA ACAAACGATC
GATGACGAAT CGAGCAAGGA GACCGGAAGG TGA
|
|---|
| Protein sequence | MKYVSQMPGT EETAAARPSG VSAERSTRAR VARLILEHGP ITAAALGERL GLTPAAVRRH
LDALLAEGMI EPRTARPRGQ RGRGRPAKLF AITDAGRSAF EHAYDGLAGN ALRFLAERVG
EEAVAEFARS QVSGLVGRLQ LEMRKVPADQ RVRVLAEALS ADGYAASASK ASLGGEQLCQ
HHCPVAHVAA EFPQLCEAET EAFAQILGTP VQRLATIAHG DGVCTTHVSP HRAAEPDARE
REAGRRAPGR SRPSIRQQTI DDESSKETGR
|
|---|
| |