Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5984 |
Symbol | |
ID | 8669278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 6559291 |
End bp | 6560064 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | ABC transporter |
Protein accession | YP_003341461 |
Protein GI | 271967265 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.509721 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.150188 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTCTGATT CGAGCCGAGT CCGCTCGGGA TCCACCCTTG AGATCCGTGA CCTGCACGTC GCCGTCGAGG ACAAGGAAAT CCTGCGCGGC GTCAACCTGA CCGTCCGGTC CGGCGAGACC CACGCCATCA TGGGCCCCAA CGGCTCGGGC AAGTCCACGC TCGCCTACGC GATCGCCGGC CACCCCAAGT ACACCGTGAC CGGTGGCCAG GTCCTGCTGG ACGGCGTCGA CCTGCTGGAG CTGACGGTCG ACGAGCGCGC CCGCGCCGGC CTGTTCCTCG CCATGCAGTA CCCCGTCGAG GTCCCCGGCG TCAGCGTCTC CAACTTCCTG CGCTCGGCGG TCACCTCCGT GCGCGGCGAG GCCCCCAAGC TCCGCGAGTT CGCCAAGGAC CTGAAGGCCG GCATGGACGC CCTGTCCATC GACGCCGCCT TCGCCCAGCG CAACCTGAAC GAGGGCTTCT CCGGTGGCGA GAAGAAGCGC CACGAGATCC TCCAGCTCGA ACTGCTCAAG CCGAAGATCG CCGTCCTCGA CGAGACCGAC TCCGGCCTCG ACGTCGACGC GCTGCGCGTG GTCTCCGAGG GCATCAACCG CTTCCGTGAC TCCGGCGAGA CCGGCGTCCT CCTCATCACC CACTACACCC GCATCCTGCG CTACGTGAAG CCGGACTTCG TCCACGTCTT CGCGGGCGGC CGGATCGTGG AGCAGGGTGG CCACGAGCTC GCCGACAAGC TCGAGGCCGA GGGCTACGAG GCCTACACGA AGGCATCGGT CTGA
|
Protein sequence | MSDSSRVRSG STLEIRDLHV AVEDKEILRG VNLTVRSGET HAIMGPNGSG KSTLAYAIAG HPKYTVTGGQ VLLDGVDLLE LTVDERARAG LFLAMQYPVE VPGVSVSNFL RSAVTSVRGE APKLREFAKD LKAGMDALSI DAAFAQRNLN EGFSGGEKKR HEILQLELLK PKIAVLDETD SGLDVDALRV VSEGINRFRD SGETGVLLIT HYTRILRYVK PDFVHVFAGG RIVEQGGHEL ADKLEAEGYE AYTKASV
|
| |