Gene Sros_5984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5984 
Symbol 
ID8669278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6559291 
End bp6560064 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content68% 
IMG OID 
ProductABC transporter 
Protein accessionYP_003341461 
Protein GI271967265 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.509721 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.150188 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTGATT CGAGCCGAGT CCGCTCGGGA TCCACCCTTG AGATCCGTGA CCTGCACGTC 
GCCGTCGAGG ACAAGGAAAT CCTGCGCGGC GTCAACCTGA CCGTCCGGTC CGGCGAGACC
CACGCCATCA TGGGCCCCAA CGGCTCGGGC AAGTCCACGC TCGCCTACGC GATCGCCGGC
CACCCCAAGT ACACCGTGAC CGGTGGCCAG GTCCTGCTGG ACGGCGTCGA CCTGCTGGAG
CTGACGGTCG ACGAGCGCGC CCGCGCCGGC CTGTTCCTCG CCATGCAGTA CCCCGTCGAG
GTCCCCGGCG TCAGCGTCTC CAACTTCCTG CGCTCGGCGG TCACCTCCGT GCGCGGCGAG
GCCCCCAAGC TCCGCGAGTT CGCCAAGGAC CTGAAGGCCG GCATGGACGC CCTGTCCATC
GACGCCGCCT TCGCCCAGCG CAACCTGAAC GAGGGCTTCT CCGGTGGCGA GAAGAAGCGC
CACGAGATCC TCCAGCTCGA ACTGCTCAAG CCGAAGATCG CCGTCCTCGA CGAGACCGAC
TCCGGCCTCG ACGTCGACGC GCTGCGCGTG GTCTCCGAGG GCATCAACCG CTTCCGTGAC
TCCGGCGAGA CCGGCGTCCT CCTCATCACC CACTACACCC GCATCCTGCG CTACGTGAAG
CCGGACTTCG TCCACGTCTT CGCGGGCGGC CGGATCGTGG AGCAGGGTGG CCACGAGCTC
GCCGACAAGC TCGAGGCCGA GGGCTACGAG GCCTACACGA AGGCATCGGT CTGA
 
Protein sequence
MSDSSRVRSG STLEIRDLHV AVEDKEILRG VNLTVRSGET HAIMGPNGSG KSTLAYAIAG 
HPKYTVTGGQ VLLDGVDLLE LTVDERARAG LFLAMQYPVE VPGVSVSNFL RSAVTSVRGE
APKLREFAKD LKAGMDALSI DAAFAQRNLN EGFSGGEKKR HEILQLELLK PKIAVLDETD
SGLDVDALRV VSEGINRFRD SGETGVLLIT HYTRILRYVK PDFVHVFAGG RIVEQGGHEL
ADKLEAEGYE AYTKASV