Gene Sros_5954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5954 
Symbol 
ID8669248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6526706 
End bp6528235 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003341432 
Protein GI271967236 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0911535 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0715474 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGATGC CGGGGGGCCA CATGACATCG GGGACGGGTG CTCGCGAGAA GACTTTCTTC 
GGACATCCGC GGGGCCTGGC CACGCTGTTC GGCACCGAGA TGTGGGAGCG CTTCAGCTGG
TACGGCCTCC GGGCCATCCT GGCCACCTTC ATGGCGGCCT CCCCGGTCGT GGGCGGCCTC
GGCCTGACGC AGCAGACCGC CCAGGCGATC GTCGGCATCT ACGGCGCGCT CATCTATCTG
GTGGCCCTGC CCGGCGGCTG GGTCGCCGAC CGCGTGCTCG GCGCCCGCAG GGCGGTGCTG
TGGGGCGGCT TCGTCATCAT GTGCGGCCAC ATCAGCATGG CCATCCCGGT CAGGACGGGC
GTCTTCGTCG CCCTGGGCCT GCTGCTCATC ATCATCGGGA CCGGGCTGCT GAAGCCCAAC
ATCTCCGCCA TGGTCGGCAA GCTCTATCCG GAGGACGACG ACGCGCGCAG GGACGCGGGC
TTCTCCATCT TCTACCTCGG CATCAACCTC GGCGCCTTCA TCGCCCCCAT CGTCGTCGGC
TGGCTCGCCG CCGACAACCG CTGGCATCTG GGCTTCGGCG CGGCGGCGGT CGGCATGGCC
CTGGGCCTGC TCCAGTACGT GCTGGGCCGC CGCCACCTCA AAGGCGCGGG CGAGGAGCCC
GGCCACCGGC TGACCCCGCG CGAGCACCGG CACTTCGTGC TGTCGGCCCT CGCCGCCGCC
GTCGTGATCG CCGGCGCCCT GGCCGCCTGG GTGGCCTCGG GCACGTTCGA CCTCGACACC
TTCGCGCTCG TGGTGACGGT GATCATCGTC ATCGTCCCGG TGGTCTACTT CGCCTACGTC
CTGTTCGGCA GCCACAACCT GACCGACGAC GAGCGCTCGC GGATGAAGGC CTACATCTGG
CTGTTCATCG CCGCCGCCGT CTTCTGGATG ATCTACGACC TGGCCCCGAC GGTGCTGCTG
TTCTTCGCCC AGGACAGGAC CGACCTGTCG CTGTTCGGCA TCCGGATCAC GGCAGCGACC
ACGCAGTCGT TCAACCCGCT GTTCATCATG ATCTTCGTGC CGGTCTTCGC CTCGCTCTGG
GTCAGGCTGG GCAACCGGGT GACCGCTCCG CAGAAGTTCG CCTTCGCGCT GTTCATGATC
GCTCTGAGCT TCGTGGTCAT GGCCCTGGCC GCCCGGCTGG CCGAGAGCGG GAGGATCTCG
GTGTGGTGGC TGGTGCTGGT CTACCTCATC CAGGTCTTCG GCGAGCTGTC GCTGAGCCCG
GTCGGCCTGT CGGTCACCAC CAAGCTCGCC CCCCAGGCGT TCAAGGGCCA GATGCTCGGG
GTGTGGTTCA TCGCCGTCTC GGTGGGCGAC GCCGTGGGCG GGCAGACGGG CCGCCTGAAG
AACTACATGT CGGATCCCGC GTACTTCCTG ACACTCGCGG CGATCGCCGT CGTGGCGGGC
CTGGCGCTGC TCGCGTCCGT CGGCAGGCTC CGGGCCATGA TGCGCGAGCA CCACGAGAGT
GCGGCGGGGA CGGGGCCCGC GTCGCCCTGA
 
Protein sequence
MMMPGGHMTS GTGAREKTFF GHPRGLATLF GTEMWERFSW YGLRAILATF MAASPVVGGL 
GLTQQTAQAI VGIYGALIYL VALPGGWVAD RVLGARRAVL WGGFVIMCGH ISMAIPVRTG
VFVALGLLLI IIGTGLLKPN ISAMVGKLYP EDDDARRDAG FSIFYLGINL GAFIAPIVVG
WLAADNRWHL GFGAAAVGMA LGLLQYVLGR RHLKGAGEEP GHRLTPREHR HFVLSALAAA
VVIAGALAAW VASGTFDLDT FALVVTVIIV IVPVVYFAYV LFGSHNLTDD ERSRMKAYIW
LFIAAAVFWM IYDLAPTVLL FFAQDRTDLS LFGIRITAAT TQSFNPLFIM IFVPVFASLW
VRLGNRVTAP QKFAFALFMI ALSFVVMALA ARLAESGRIS VWWLVLVYLI QVFGELSLSP
VGLSVTTKLA PQAFKGQMLG VWFIAVSVGD AVGGQTGRLK NYMSDPAYFL TLAAIAVVAG
LALLASVGRL RAMMREHHES AAGTGPASP