Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5825 |
Symbol | |
ID | 8669119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 6391980 |
End bp | 6393287 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | putative RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003341313 |
Protein GI | 271967117 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACGCCCG CGGCCACCGG CGGCCCGCCG AGCACCGAGT CGGCGCGGCG GGCCGTCGAG GCCGTCTGGC GGATCGAGTC CGCACGGATC GTCGGGGCGC TGGCCCGCTA CACCGGGGAC TTCGAGCTCG CCGAGGATGT CGCGCAGGAG GCGGTGGCGG AGGCACTCGT CACCTGGTCG CGCGACGGTG CGCCGGCGAA CCCGGTGGGC TGGCTGCTGG CGACCGCGCG GCGGCGCGCC GTCGACTCCT TCCGCCGCCG GTCGGCGCTC GACGAGCGGT ACGCCATGCT CGCCGGCCGG CTCGCCGAGG GGGAGACGAG CTCGGGCACG ACGGCCCCGC GGGACCGGCC GGACGACCTG CCGTGGGATC CCGACCGGAT CGACGACGAC ATCCTCGCGC TGATGTTCGT GGCCTGCCAT CCGGTGCTCT CGCCCGAGGC CCGCGTGGCC TTGACGCTGC GCGCGGTGGG CGGCCTGTCG AGCGAGGAGA TCGCCCGGGC GTTCCTCGTG CCGGTGCCGA CCCTCCAGGC GCGGATCACA CGCGGGAAGA AGACGATCGC CGCGGCGGAA GTGCCGTTCG AGCTGCCGCC GTCCGAGGAA CGGCGCGAGC GGCTCGGCGG TGTCCTGAGT GTGCTGTACG TGATCTTCAC GGAGGGCTCG ACGGCAACGA CCGGTGACCG CCTGCTCCGT CCCGATCTCG CCTACGAGGC GATCCGGCTG GCCCGGATGC TGGTCACGTT GCTGCCCGAC GAGCCGGAGG TGCACGGGCT GCTCGCCCTG TTCGAGCTCA CGGCCGCGCG CTTTCCCGCA CGCACCGGGC CCGACGGCGA AGCGGTGCTC CTGGAGGATC AGGACCGGCG CCTGTGGGAC CGGTCGGCGA TCCGTCGCGG CCTGGCCGCG ATCGGCCGGG CCTCGGCTGT CGGACGCGGC CTCGGACCCT ACGGACTGCA GGCGGCGATC GCCGCCTGCC ACGCGTCGGC GTCCTCGGTG CCGGAGACCG ACTGGGAGCG CGTCGTGCTC CTGTACGAGG TGCTCGGCCG CGTGGCCCCG TCACCCGTCG TCGAGCTCAA CCGGGCCGTC GCCGTCGCGA TGGCGGACGG ACCACGGCAG GCGCTGTCCA TCGTGGACGA GCTGGTCGCC TCCAACGGCC TGGCGGGGTC GCACCTGCTC CCGAGCGTGC GCGGCGAGCT GCTGGCCCGG CTCGGCCGGA CCGCCGAGGC GCGTGCCGAG CTGGAGCTCG CCGCCCGGCT GTGCCGCAAC GTCCGCGAGC GGTCGGTGCT GCTGCGCAAG GCGGCCGCGC TGGTGTGA
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Protein sequence | MTPAATGGPP STESARRAVE AVWRIESARI VGALARYTGD FELAEDVAQE AVAEALVTWS RDGAPANPVG WLLATARRRA VDSFRRRSAL DERYAMLAGR LAEGETSSGT TAPRDRPDDL PWDPDRIDDD ILALMFVACH PVLSPEARVA LTLRAVGGLS SEEIARAFLV PVPTLQARIT RGKKTIAAAE VPFELPPSEE RRERLGGVLS VLYVIFTEGS TATTGDRLLR PDLAYEAIRL ARMLVTLLPD EPEVHGLLAL FELTAARFPA RTGPDGEAVL LEDQDRRLWD RSAIRRGLAA IGRASAVGRG LGPYGLQAAI AACHASASSV PETDWERVVL LYEVLGRVAP SPVVELNRAV AVAMADGPRQ ALSIVDELVA SNGLAGSHLL PSVRGELLAR LGRTAEARAE LELAARLCRN VRERSVLLRK AAALV
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