Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5795 |
Symbol | |
ID | 8669089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 6353958 |
End bp | 6355565 |
Gene Length | 1608 bp |
Protein Length | 535 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | membrane protein putative virulence factor-like protein |
Protein accession | YP_003341284 |
Protein GI | 271967088 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.401085 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0760131 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAGC AGCCTCGTCT CATCCGAACA GGCCGGAGGA TGGCGCTGGC CACCCTCACC TCCCGGGTGA CCGGTTTCCT CCGGACGCTG GCGCTCGTGG TCGCGCTGGG CCTCGGAACC CGGCTGCTCG ACGCCTACAC GGTGGCGAAC ACGACCCCGA ACACGATCTA TGAGCTGGTG CTCGGCGGCA CGCTGGCCGG CGTCATGATC CCCCTGCTGA TCCGGGCGGC CGCGGAACCC GGCGTCGACA GCGACCTCCA CGCCCAGCGG CTGCTGTCGG CGATCGTCTA CGTCCTCGGC GCCACCGTCG TCCTCACGGT GGCGGCGGCC CCCTGGATCG TGGACCTCTA CGCGCCGGGG TTCAGCCCGG AACAGCGGGA CCTGGCGATC CTTCTCACCA GGTACTTCCT GCCGCAGATC CTGCTCTACG GCCTCGGCAC CGGCATGGCG GCCGTTCTCA ACGCGCGGGG CGACCTGGCC ACGCCGATGT GGGCGCCGGT CGCCAACAAC GTCGTGGTCA TCGCCACCGC GCTCGGCTAC GTCCTGCTCG GAGGCGGAGG AGAGCTCGCC GCGCTGACCC CGGGACAGTC ACTGCTGCTG TCGCTCGGCA CCACGGCCGG AGTCGCCGTC CAGACGCTCG TGCTGGCGGC GGCGCTCCGG CGGAACGGGT TCCCCCTGCG GCTACGGCTG GACCCGCGAG GCGCCGGGCT CCGCCGGACC GCCCGCATGG CCGGCTGGAC CCTGCTCTAC GTGATCGCGG CCCAGGCCGT CTTCACCGTC GGGACCCGGC TGGCGTCCGG TGCCGGCCCG GGTCCGGTGG CCGTCTACCA GAACGCCTAC ACGCTCTTCC AGCTCCCCTA CGCCGTCATC GCGGTGTCCG TCATCACGGG GGTGCTGCCG AGGATGAGCG CGGCCGCCGG CGGGCGGGAC CTCGCCAGGA TCACCGCCGA CCTCTCCCAC GGTCTGCGGC TCACCGCGGT CGTGCTCATG CCCGTCGCCG CCGCGCTCGT CGTGCTCGGG CCGCAGATCA CCACGCTGCT GTTCGCTCAC GGCAACGCCT CGGCCGACGC GGCCCGCCTC ACCGGTTCGG TCCTGGCGGC CTTCGGTTTC GCGCTGGTCC CCTTCGCCGG CTACCAGATC ATGCTGCGCG TCTTCTACGC CCTCCAGGAC ACCCGGACCC CCGCTCTCAT TCACGTCGGC GTCGCCGTGG TCGCGATCGC CTCGTCGGTC GCGCTCTCCT CCGCGCTGCC CGCCCGGGAC CTCCTCGTCG GCCTGGCCGC CTGCTACGCG GCCGCCCACG CGGTCGGGTT CGCCGCGGCG GCGGCCGTTC TGCGCCACCG GCTGGGCCGG ATCGACGGGC ACAGGCTGCT CAGGAGCCAC TCCCGGATGC TCGCCGCGTC CCTCGCCGCC GGCGGCGCCG GGGCGCTCGT CGCCTACGCC CTGCGCCACG GAGGCGTGGC CGGTGCCGGG TGGTCCGGAT CCCTGGTGAC CGTGCTCGCC GTCTCGGCGG TCGGCGCCGG CCTCTACGCC CTCGTCGCCC ACCTGCTGCG CGTCCCCGAG CTGCGCACTC TGGTGAGGGC GCTGCGGCCG GGCACGGCCG CCGGTTGA
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Protein sequence | MTEQPRLIRT GRRMALATLT SRVTGFLRTL ALVVALGLGT RLLDAYTVAN TTPNTIYELV LGGTLAGVMI PLLIRAAAEP GVDSDLHAQR LLSAIVYVLG ATVVLTVAAA PWIVDLYAPG FSPEQRDLAI LLTRYFLPQI LLYGLGTGMA AVLNARGDLA TPMWAPVANN VVVIATALGY VLLGGGGELA ALTPGQSLLL SLGTTAGVAV QTLVLAAALR RNGFPLRLRL DPRGAGLRRT ARMAGWTLLY VIAAQAVFTV GTRLASGAGP GPVAVYQNAY TLFQLPYAVI AVSVITGVLP RMSAAAGGRD LARITADLSH GLRLTAVVLM PVAAALVVLG PQITTLLFAH GNASADAARL TGSVLAAFGF ALVPFAGYQI MLRVFYALQD TRTPALIHVG VAVVAIASSV ALSSALPARD LLVGLAACYA AAHAVGFAAA AAVLRHRLGR IDGHRLLRSH SRMLAASLAA GGAGALVAYA LRHGGVAGAG WSGSLVTVLA VSAVGAGLYA LVAHLLRVPE LRTLVRALRP GTAAG
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