Gene Sros_5734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5734 
Symbol 
ID8669028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6276986 
End bp6278227 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003341225 
Protein GI271967029 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.422452 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.261408 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCCA AGGGAATCGG CGTCGTCGGC GCCGGGATTT CCGGTCTCAC GCTGGCTCTG 
CGGCTGCAGC AGCTCGGCGT GGACGTGACC CTCTACGCCG ACAGCTCCGC CGACGAGATG
AGGCGGAGCC GGCTGCCCAA CACCGTCGCC CGGATGAAGT CCACCCGCGC CCGCGAGCAG
GCACTGGGCA GCGAGCACTT CACGCCGGCC GTCAGCCTGT CGGACACCGC GAAGATCTCG
ATCAAGGGCG AGCCGCCGCT GGAGTTCCAG GGCTCGCTGG AGCACCCCTT CCACGCGCTC
GACTTCCGTC TCCTGATCCC CGCCTTCCTC GACGACTTCA CCTCCCGCGG AGGGCGGCTG
GTGGTGACGG AGGGCTCCCC CGGCGCGGCG GAGGTCGAGA CGTGGTCGGC GGACCACGAG
CTGATCGTGG TGGCGGCCGG GCGGCGTTCG GTGGCCGAGC TGTTCCCCCG CGACGACCGC
CGCTCTCCCT ACGACCGCCC GCAGCGGTCG CTGCTGGCGG GGCTCTACAC CGGCATCGCT
CCGGCGGGCT TCAGCTACAA CGTCTCGCCG GGCTGCGGGG AGATCTTCCA GATGCCGATG
TGGACGCGGG ACGGCCTGGC CGCCGGGATG CTGGTCGAGG CGATCCCGGG CGGCCCGCTG
GAGCCTTTCA CCCGGCTCTC CTACCCGGAC GACCCGCGCG CCTTCACCCG GACGCTGGAG
AAGGTGCTGG CGGAGCACGC GCCGCGGATC GCCGAGCGGA TCGACTCCGG CTCGTTCGCC
CCGCTCGGTC CCGACGACCT GCTCCAGGGC GCGGTCACAC CGGTGGTCCG CACACCGGTC
GCGAAGCTCT CCACCGGGCG GGTCGCCCTC GCCATAGGCG ACGCCTGGAT CACCAACGAT
CCGATCACCG GCCAGGGCGC CAACCTCGGC TCGCACTGTG CCTGGGTGAC CGCCGAGGCC
ATCGCCGGGG GCGGGCCGTA CGGGGAGGAG TTCGGCCGTT CCGTGGCCGC CGAGATGTGG
CGGGTCGCCG GACCGGTCAC CGAGTGGAGC AACTCCTTCC TCCAGCCGCC CACCGAGCAC
GTCTTCCGGC TTTTCGCCGG CGCCGCCGTG GACAGGGGCC TGGCGGACCG CTTCGTCAAC
CTGTTCAGCG ACCCCGTCGC CGCCTGGGCC GTGTTCTCCG ACCCGGCCCA GGTCGACGCC
CTGCTGGCCG CCTCGGAGGT CTCCCTGCCC GCGGCGTCAT GA
 
Protein sequence
MTSKGIGVVG AGISGLTLAL RLQQLGVDVT LYADSSADEM RRSRLPNTVA RMKSTRAREQ 
ALGSEHFTPA VSLSDTAKIS IKGEPPLEFQ GSLEHPFHAL DFRLLIPAFL DDFTSRGGRL
VVTEGSPGAA EVETWSADHE LIVVAAGRRS VAELFPRDDR RSPYDRPQRS LLAGLYTGIA
PAGFSYNVSP GCGEIFQMPM WTRDGLAAGM LVEAIPGGPL EPFTRLSYPD DPRAFTRTLE
KVLAEHAPRI AERIDSGSFA PLGPDDLLQG AVTPVVRTPV AKLSTGRVAL AIGDAWITND
PITGQGANLG SHCAWVTAEA IAGGGPYGEE FGRSVAAEMW RVAGPVTEWS NSFLQPPTEH
VFRLFAGAAV DRGLADRFVN LFSDPVAAWA VFSDPAQVDA LLAASEVSLP AAS