Gene Sros_5691 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5691 
Symbol 
ID8668985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6224730 
End bp6225239 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content67% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003341182 
Protein GI271966986 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.187128 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.451104 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTCG ATGAGGAGTA CACCGCCTAT GTAAGTGGGC GGCTGCCATG GTTGCGGCAG 
ATCGCCTACC CGCTGTGCCA GGACTGGCAC CGTGCCGACG ATCTGGTGCA GACGGCGATC
ACAAGGCTGT ACGTCAAGTG GCGCCACGCG CGCCTGGCCG ACGACCTCGA CGCCTACGTC
CGGGTGATCC TGATCCGGGT CTTTCTCGCC GAGCAGCGAG GAGGCTGGTT CTCCCGGGTA
CGGCTGACCT CCACGCTGCC CCATTCCTCC TTCGAGGGCA GCGACCGCGA CACGGCCATG
GACCTGCGCC GCGCACTGGC CGCAGTTCCG CCGCGCCAGC GTGTAACCCT CGTGCTGCGT
TTTCACTGCG ACCTGAGTGT CGAGCAGACC GCCCGCACAC TCGGCTGCTC CACCGGAACC
GTCAAAAGCC AGACCGCCCG CGGCTTGGCC ACCCTGCGCT CGGTACTCGG CGCGCAGGAC
ACTCGTGTAG CGCATAAGGA GGAGTGCTGA
 
Protein sequence
MSLDEEYTAY VSGRLPWLRQ IAYPLCQDWH RADDLVQTAI TRLYVKWRHA RLADDLDAYV 
RVILIRVFLA EQRGGWFSRV RLTSTLPHSS FEGSDRDTAM DLRRALAAVP PRQRVTLVLR
FHCDLSVEQT ARTLGCSTGT VKSQTARGLA TLRSVLGAQD TRVAHKEEC