Gene Sros_5556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5556 
Symbol 
ID8668850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6077140 
End bp6077892 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content70% 
IMG OID 
ProductSiderophore-interacting protein-like protein 
Protein accessionYP_003341051 
Protein GI271966855 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.611313 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGAA CAACGCGTAA CCCGCTCGCC GGTGTCTTCG GCAAATACGC CGTTCCGGCG 
ACCATCACTC ACGTCGAGCC GGTCACGCCC ACGATGCGGC GGATCCGGCT CGAGACCGAC
CAGCCCATCG CCTTCCCGTA CACCCCCGGC CAGCACATCA GGATCCAACT GAAAGATCCG
CTGTCGATGT CGGGCATCCT GCGCCCCTCC GAGACGTTGC GCACCTACAC GATCTGGGAC
CTCTCACCCG AGCGACGGAC ACTCGAACTG CGCGTCCACC TGTACGGGGG CGATGGAATC
GGGCTGAGGT GGGCGCACGA GGCGCGGCCC GGAGAGGCGG TGACCTTCTG GTGGCCGCAG
GGTGACTTCT TCACCCGCGA GGCGGCCTAC CACGTGTTCA TCGGGGAGGA GACCGCCGGC
GCCGCCTTCG GGCCGATGAT CCGGGCACTG GGAGCCTCAG CCGAGGTGTA CGGGATCCTG
GAGAGCGAGG CCTCCGAGCA CGACCTGCCC ATGCCGGGAA CCCGCCCACT GCGCCGCGTT
CACCGCCATG GCGCGCCGGC CGCCTCCTCC CGGGTTCTGC TCGCGGCGGT CGCCGAGCTC
GACCTGCCGG GCAACGCGGG GGCCGCCTAC GTGGCCGGTG AGGCCAGGAC CTGCCAGTTG
GTGCGCGACT TTCTCGTCCG CGAGCGCAAC TGGCCGCGGA CCTCCATCAC GGTCAAGCCG
TTCTGGACAC CGGGCAAGCG CGGCCTGCAC TGA
 
Protein sequence
MPRTTRNPLA GVFGKYAVPA TITHVEPVTP TMRRIRLETD QPIAFPYTPG QHIRIQLKDP 
LSMSGILRPS ETLRTYTIWD LSPERRTLEL RVHLYGGDGI GLRWAHEARP GEAVTFWWPQ
GDFFTREAAY HVFIGEETAG AAFGPMIRAL GASAEVYGIL ESEASEHDLP MPGTRPLRRV
HRHGAPAASS RVLLAAVAEL DLPGNAGAAY VAGEARTCQL VRDFLVRERN WPRTSITVKP
FWTPGKRGLH