Gene Sros_5534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5534 
Symbol 
ID8668828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6052884 
End bp6054914 
Gene Length2031 bp 
Protein Length676 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003341031 
Protein GI271966835 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.174721 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACGT ATCGAGCGGG CCGGCCGTGG CGGTCCGCCG CCATCGGTCG CATCGCCGCG 
GTAGCCCTCA GCCTCGTTCT CACCGGCGCC CTCGCCCCCG CCCCCGCGGC GGGTGCCGTC
GCGCCCGCGC CGGCCACCAC CGGCGCGGCG GGCGGAGCCG CCGCCTGCCC CACCGACCCG
GCCACTCCCA AACACCGGCT CCGCGCCATG TGGATCGCCA GCGTGGCCAA CATCGACTGG
CCGAGCAGGA CCGGCCTGAG CGTGCAGGCG CAGCAGGCCG AGTTCCGTGC CTGGCTGGAC
CTCGCGGCGC AGCGGAACAT GAACGCCGTC GTCGTGCAGG TCAGGCCGAC GGCCGACGCG
TTCTGGCCGT CACCCCATGA GCCGTGGTCG CAGTGGCTGA CGGGCACCCA GGGGGGCGAC
CCCGGCTACG ACCCGCTGGC GTTCATGGTG AGCGAGGCGC ACGCCCGCGA CATCGAGTTC
CACGCGTGGT TCAACCCCTA CCGGGTCGCC AACCACGACG ACCCCACCCG GCTGGTGGCC
ACGCACCCGG CCCGGAGGAA TCCCGGCTGG CGGTTCGCCC ACGGCGGCAA GCTCTACTAC
AACCCGGGGA TCCCCGCGGT CCGCGGCTTC ATCGAGGACG CCGTCATGGA CGCCGTCACC
CGTTACGACA TCGACGGCGT GCACCTCGAC GACTACTTCT ACCCGTATCC GGTCAGCGGC
GAGACGATCC CGGACGCCTC CGCCTACGCC CAGTACGGCG CCGGTTTCGG CAACGTCCAC
GACTGGCGGC GCGACAACGT CAACCTGCTG GTGAAGGAGC TGGGCCAGCG GATCCACGCG
GCCAAGTCGT GGGTCGAGTT CGGGGTCAGC CCGTTCGGCA TCTGGCGCAA CGCCGCCACC
GACCCGCTCG GTTCGCAGAC CTCCGGCATG CAGTCGTACG ACGCCGTCTA CGCCGACACC
CGGCTCTGGG TGAAGCAGGG CTGGGTCGAC TACATCGCGC CGCAGGTCTA CTGGCACATC
GGGCATCCCA CCGCCGACTA CGAGACGCTC ACCGCCTGGT GGGCCTCCGT GGTCAAGGGC
ACCGGCGTGC GGCTCCTCAT CGGGCAGGCC GCCTACCGGG CCGGAGCGGC CGGCCAGGAC
GCGGCCTGGC AACGGCCCGG GGAACTGGCC GACCACCTCC AGTACAACCG GCGGCACCCG
GAGGTGGTCG GCGACGTCTT CTTCAGCGCC AAGGACATCC GGGCCGACCG GATCGGCGCC
GTCTCCCGCC TGGTGGGCGA CCACTACTCC AGGCCCGCCC TGATACCCGC CCGCGGCGGC
GCGGCCGCGC CGGCCAGCCC CTCGATCACC TCGGCGACCC GCCTCCCCGG CGGGGTCTCC
CTGTCATGGC AGCGCGACGG ATCGAGCAGC CCGCTCTCGT ACGCGATCTA CCGGGTCGAC
TCCTCCCCGG CGGCGGACCC GTGTTTCTTC GCCGACGCCC GCAACCTGCT CAAGACGACC
CGCGGGACGT CCTTCACCGA CACCACCGCC ACCGCGGGCA CCTACACCTA CTACGTGACG
GCCATGGACC GGCTGCACCA CGAAAGCGCG CCGAGCGCGG GCCGGGTGGT CGCGGCCACC
GGTCCGTTCA GCGTCGTCGT CGACAACCGT GACGCCGGCT TCACCGCGGG CTCCGGCTGG
GGCACCTCAA GCTTCTCCTC GCAGCTCCAC GGCACCGACT ACCGGTTCGC CGAGCCCGTC
GCGGCGAGCG ACCCGGCGTG GTTCAAGGCG CAGATCCCCG CCGCCGGCAG CTACCGGATC
GAGATCTGGC ATCCGGCGAA CTCCGGCTAC AACAGCGCGA CGCCGTTCAT CGTGGCGGCC
GGCGGAGGCA ACCAGGTGAT CAACGTCGAC CAGCGCGTCA GCGGCGGCCA GTGGCGCAGC
CTCGGCACGT TCACCCTCTC CGCCGGCGCC TACAACGTCG TCGGGGTGAG CCGCTGGGTC
TCCACCGCCG GCTACGTCAT CGCCGACGCC GTACGCATCA CCAGGGTCTG A
 
Protein sequence
MTTYRAGRPW RSAAIGRIAA VALSLVLTGA LAPAPAAGAV APAPATTGAA GGAAACPTDP 
ATPKHRLRAM WIASVANIDW PSRTGLSVQA QQAEFRAWLD LAAQRNMNAV VVQVRPTADA
FWPSPHEPWS QWLTGTQGGD PGYDPLAFMV SEAHARDIEF HAWFNPYRVA NHDDPTRLVA
THPARRNPGW RFAHGGKLYY NPGIPAVRGF IEDAVMDAVT RYDIDGVHLD DYFYPYPVSG
ETIPDASAYA QYGAGFGNVH DWRRDNVNLL VKELGQRIHA AKSWVEFGVS PFGIWRNAAT
DPLGSQTSGM QSYDAVYADT RLWVKQGWVD YIAPQVYWHI GHPTADYETL TAWWASVVKG
TGVRLLIGQA AYRAGAAGQD AAWQRPGELA DHLQYNRRHP EVVGDVFFSA KDIRADRIGA
VSRLVGDHYS RPALIPARGG AAAPASPSIT SATRLPGGVS LSWQRDGSSS PLSYAIYRVD
SSPAADPCFF ADARNLLKTT RGTSFTDTTA TAGTYTYYVT AMDRLHHESA PSAGRVVAAT
GPFSVVVDNR DAGFTAGSGW GTSSFSSQLH GTDYRFAEPV AASDPAWFKA QIPAAGSYRI
EIWHPANSGY NSATPFIVAA GGGNQVINVD QRVSGGQWRS LGTFTLSAGA YNVVGVSRWV
STAGYVIADA VRITRV