Gene Sros_5454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5454 
Symbol 
ID8668748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5977771 
End bp5978418 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content75% 
IMG OID 
ProductBioY protein 
Protein accessionYP_003340954 
Protein GI271966758 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0263826 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.18678 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGATG AAGGGAAGGC ATTGCCAGAG CCCGGAGAGG CAGCCGGCTC CTCGTCAGGC 
CGCAGGTTCC CCACCGGGGA TCTGGCGCGG ATCAGCGTGT TCGCCGCGCT GATCGCCGCG
CTCGGCCTGC CGGGTGCGCT GAACGTCTTC GGCAACGCGG TGCCGATCAC GCTGCAGACG
TTCGGCGTCA TGCTCGCCGG CGCGATCCTG GGCGCCCGGC GGGCCGCTCT CGCCATCGCG
GTCCTGCTCG TGCTCGTCGC CGCGGGCCTG CCCCTGCTGG CCGGCGGCCG CGGCGGCCTG
GGCGTCTTCG CGGGGCCCTC GGCCGGGTTC CTGATCGGCT GGCTCCCCGG CGCGGCCGTG
ACCGGCTGGA TCGTCGAGCG CGGCGGCCGG TCACCGGGCA TCGTCCGGCT GCTGGCCGCC
TGCCTGGCCG GCGGCGTCGG AGTGGTCTAC CTCTTCGGTG TCCCCGTGCA GGCGGCGCTC
ACCGGGCTCC CGCTGGGCAA GGCCGCGCTG CTCAGCTCCG CCTTCCTGCT CGGCGACGTG
ATCAAGGCGG TGCTCGCGTC CATCGTGGTG CGGGGCACGC AGCGGGCCTA CCCCGACGCG
GTTCCCGCCG TGCACCTCGA GCGGCTCCGG GTCTCCGGGG AGCGTTGA
 
Protein sequence
MTDEGKALPE PGEAAGSSSG RRFPTGDLAR ISVFAALIAA LGLPGALNVF GNAVPITLQT 
FGVMLAGAIL GARRAALAIA VLLVLVAAGL PLLAGGRGGL GVFAGPSAGF LIGWLPGAAV
TGWIVERGGR SPGIVRLLAA CLAGGVGVVY LFGVPVQAAL TGLPLGKAAL LSSAFLLGDV
IKAVLASIVV RGTQRAYPDA VPAVHLERLR VSGER