Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5439 |
Symbol | |
ID | 8668733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 5958888 |
End bp | 5959742 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | Universal stress protein UspA and related nucleotide-binding protein-like protein |
Protein accession | YP_003340939 |
Protein GI | 271966743 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.132119 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCTTG TGGGAGTCGA CGGTTCACCG GCCGCGCTTG AGGCCGTGAG CTGGGCCGTA CAGGAGGCAG CGCTACGCGG GGCCGGGCTG CGCGTCGTGC ACGTCATGCC GGCCTGGCCG CTGGAGATGT CCGAGGACGC CCCGTACGCC GACGTGGGGC GCTGGATGCG CGACGGGGCC GCCTCCATGC TGACGGAGGC GGTGGAGCGG GCCCGTGAAG CGGACGCTCG TGTCAGGGTG GAGTCGCAGC TGCTCCCGGG CGACCCCCGG CTCGTCCTGA TCGAGGCGGC GAAGGACGCC GACCTCCTGG TGGTCGGCAG TCACGGGCTG GGCGGGTTCT CCGGCATGCT GCTGGGATCG GTCGCGCTGG GCGTGGCCGG ACACACCTCC TGCCCGGTCG CCGTCGTGCG GACGGTGCCC GCACAGGCAC GCGGCGAGGT GGTCGTCGGG GTCGACGGCT CTCCGGCCGG TGGGACCGCC GTCGGATTCG CCTTCGCCGA GGCGTCCCTG CGCGGCGCCG CCCTGCGGGC GGTTCACGCG TGGAACCGGC CCGTCATCGG GGGCGGCCCG TTCGCCCTGG CGTCCGCCGA GGAGATGGCC GAAGGGGAGC GGCGCCTGCT GGCCGAGGTG CTGGCGGGCT GGGCCGGGCG TCATCCGGAT GTCAAGGTCA TCGAGCAGGT GGAGCACGGG CACCCGGTGG AGCTCCTGAG AAGCGCCTCG GAACACGCGG ACCTGCTGGT CGTGGGGTCA CGTGGCCGTG GCGGCCTCGC CGGGCTCCTG CTGGGCTCGG TGAGCCACGC GCTGCTGCAC CACGCCGCCT GCCCACTGGT CGTGGCGTCC GGCACGCCGG CATAG
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Protein sequence | MILVGVDGSP AALEAVSWAV QEAALRGAGL RVVHVMPAWP LEMSEDAPYA DVGRWMRDGA ASMLTEAVER AREADARVRV ESQLLPGDPR LVLIEAAKDA DLLVVGSHGL GGFSGMLLGS VALGVAGHTS CPVAVVRTVP AQARGEVVVG VDGSPAGGTA VGFAFAEASL RGAALRAVHA WNRPVIGGGP FALASAEEMA EGERRLLAEV LAGWAGRHPD VKVIEQVEHG HPVELLRSAS EHADLLVVGS RGRGGLAGLL LGSVSHALLH HAACPLVVAS GTPA
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