Gene Sros_5439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5439 
Symbol 
ID8668733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5958888 
End bp5959742 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content74% 
IMG OID 
ProductUniversal stress protein UspA and related nucleotide-binding protein-like protein 
Protein accessionYP_003340939 
Protein GI271966743 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.132119 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTTG TGGGAGTCGA CGGTTCACCG GCCGCGCTTG AGGCCGTGAG CTGGGCCGTA 
CAGGAGGCAG CGCTACGCGG GGCCGGGCTG CGCGTCGTGC ACGTCATGCC GGCCTGGCCG
CTGGAGATGT CCGAGGACGC CCCGTACGCC GACGTGGGGC GCTGGATGCG CGACGGGGCC
GCCTCCATGC TGACGGAGGC GGTGGAGCGG GCCCGTGAAG CGGACGCTCG TGTCAGGGTG
GAGTCGCAGC TGCTCCCGGG CGACCCCCGG CTCGTCCTGA TCGAGGCGGC GAAGGACGCC
GACCTCCTGG TGGTCGGCAG TCACGGGCTG GGCGGGTTCT CCGGCATGCT GCTGGGATCG
GTCGCGCTGG GCGTGGCCGG ACACACCTCC TGCCCGGTCG CCGTCGTGCG GACGGTGCCC
GCACAGGCAC GCGGCGAGGT GGTCGTCGGG GTCGACGGCT CTCCGGCCGG TGGGACCGCC
GTCGGATTCG CCTTCGCCGA GGCGTCCCTG CGCGGCGCCG CCCTGCGGGC GGTTCACGCG
TGGAACCGGC CCGTCATCGG GGGCGGCCCG TTCGCCCTGG CGTCCGCCGA GGAGATGGCC
GAAGGGGAGC GGCGCCTGCT GGCCGAGGTG CTGGCGGGCT GGGCCGGGCG TCATCCGGAT
GTCAAGGTCA TCGAGCAGGT GGAGCACGGG CACCCGGTGG AGCTCCTGAG AAGCGCCTCG
GAACACGCGG ACCTGCTGGT CGTGGGGTCA CGTGGCCGTG GCGGCCTCGC CGGGCTCCTG
CTGGGCTCGG TGAGCCACGC GCTGCTGCAC CACGCCGCCT GCCCACTGGT CGTGGCGTCC
GGCACGCCGG CATAG
 
Protein sequence
MILVGVDGSP AALEAVSWAV QEAALRGAGL RVVHVMPAWP LEMSEDAPYA DVGRWMRDGA 
ASMLTEAVER AREADARVRV ESQLLPGDPR LVLIEAAKDA DLLVVGSHGL GGFSGMLLGS
VALGVAGHTS CPVAVVRTVP AQARGEVVVG VDGSPAGGTA VGFAFAEASL RGAALRAVHA
WNRPVIGGGP FALASAEEMA EGERRLLAEV LAGWAGRHPD VKVIEQVEHG HPVELLRSAS
EHADLLVVGS RGRGGLAGLL LGSVSHALLH HAACPLVVAS GTPA