Gene Sros_5374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5374 
Symbol 
ID8668668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5887873 
End bp5888799 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003340879 
Protein GI271966683 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0349833 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCAC ACCACGCCTC CGGACACGGC CACGGCCACG GACATGAACA CACCGACATC 
GACTGGGAGG TCATGGCCGC CCAGCTGGAG AACAGCGGCG AACTGCAGCT CCCGCTCCTC
CGCCGGACGG CGGCCCGCCT GAGGGAACTG CTCGATCCGG AGAAGGAGGT CCGGCGCATC
CTCGACATCG GCAGCGGGCC GGGGGTGATG ACCTGCGTGT TCGCCGAGAC CTTCGCGGGC
GCCGAGGCGG TCGCCGTGGA CGGCACGCCC GGGCTGCTGG AGCGAACCCT GGCCCGCGCC
GAGCGGCTCG GCCTCGACGG CAGGGTGGCC GTCCGGCACG CGAAGCTGCC CGAGGGCCTG
GACGGCGGTG ACGAGCACGG GGAAGGCGGC CTCGGCGCGG CGGATCTGAT CTGGAGCAGC
AAGGCCGTGC ACCACCTCGG CGACCAGCAG CGGGCACTGG ACGCGCTCGC CGGTGTGCTG
AGGCCCGGCG GGCTGCTCGC CGTGGCGGAG GGCGGCCTGC CGACGCGTTT CCTCCCACGC
GACATCGGCA TCGGCAGGCC GGGCCTCCAG GCCCGGCTCG ACGCCGTCCA GGAGCACTGG
TTCGAGATCA TGCGAGCCGA ACTGCCCGGC AGCACCAGCG TGGTCGAGGA CTGGCCCGCG
ATGCTCAGCC GCGCCGGGCT CACCGGCGTC GGCAGCTTCA CTTTCCTCCT CGACCTGCCG
GCGCCGCTGG ACGAGACGGC CCGCGCCTTC CTGCACGCCC ATCTGACCCG GCTGCGGGAG
ACGGTGAACG AGGTCATGGA CGCGGAGGAC CGCAGGACAC TCGACGTGCT GCTCGATCCC
GGGGCACCGG AAGGCATCCT GCGACGGCCC GACGCCTTCC TCCTCTCCGC CACCACGGTC
TTCACGGGCG TGCGCTCGGC TCGGTGA
 
Protein sequence
MSSHHASGHG HGHGHEHTDI DWEVMAAQLE NSGELQLPLL RRTAARLREL LDPEKEVRRI 
LDIGSGPGVM TCVFAETFAG AEAVAVDGTP GLLERTLARA ERLGLDGRVA VRHAKLPEGL
DGGDEHGEGG LGAADLIWSS KAVHHLGDQQ RALDALAGVL RPGGLLAVAE GGLPTRFLPR
DIGIGRPGLQ ARLDAVQEHW FEIMRAELPG STSVVEDWPA MLSRAGLTGV GSFTFLLDLP
APLDETARAF LHAHLTRLRE TVNEVMDAED RRTLDVLLDP GAPEGILRRP DAFLLSATTV
FTGVRSAR