| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_5372 |
|---|
| Symbol | |
|---|
| ID | 8668666 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 5886433 |
|---|
| End bp | 5887296 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein |
|---|
| Protein accession | YP_003340878 |
|---|
| Protein GI | 271966682 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0364521 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTCG GCCTGACCTG CCCGCGCTTC ACCTGGCCCG GCGGCGACAG CGCCATCGCC
GGGCGGTTCG CGGCCGTCGC CCGCGGCGCC GACGAAGCCG GGCTGCACAG CCTGTGGGTG
ATGGACCACT TCTTCCAGAT CCCCAACTTC GGCCCGGTGG AGGATCCGAT GCTGGAGGCG
TACGGCGCGC TGTCCTATGC GGCCGCCCTC ACCAGCCGGG TCACGCTGGG CGCCCTCGTC
ACCGGCGCCG TCCACCGTGA GCCCGGCCTG CTGGTGAAGC AGGTCAGCAC CCTGGACTCG
CTCTCCGGCG GCCGCGCCGT CCTCGGCATC GGCGCCGGCT GGTACGAGCC GGAGGCCCGC
GGTCTCGGCC TCCGCTTCCC TTCCCTGGCC GAGCGGTTCG AACGGCTGGA GGAGACGCTC
CAGATCGCCA AGCAGATGTG GAGCGACGAG GACAAACCAT ACGAGGGCAG GCACTACAGG
CTGGAACGTA CGCTCAACGC GCCGCAGGCG CGCCCGCCGA TCCTCATCGG CGGCAGCGGG
GAGAACAAGA CCCTCCGTCT CGTCGCCGAG TACGCCGACG CTTGCAACTT CCTGCACGGC
GCCGACGTGC GGCACAAGCT CGGCGTGCTG CGCGCCCACT GCGAACGACT CGGACGGCCC
TACCAGGAGA TCGAGAAGAC TCTCCACATG CGCATCCCCG ACGGTCAGAG TGTCGAGGAG
AGCGTCCAGC ACTGCGGCGA CCTGGCCGCC CTGGGCATCG ACCACGTCAT CGTCGCCGTC
CCCGATGCCG CCGCCGACTC CTCGCAGGCG CACCTGGCCG CGCTCGCCAC GCAGATCTCC
GCCATCATCC CCGCCGGGCG CTGA
|
|---|
| Protein sequence | MKLGLTCPRF TWPGGDSAIA GRFAAVARGA DEAGLHSLWV MDHFFQIPNF GPVEDPMLEA
YGALSYAAAL TSRVTLGALV TGAVHREPGL LVKQVSTLDS LSGGRAVLGI GAGWYEPEAR
GLGLRFPSLA ERFERLEETL QIAKQMWSDE DKPYEGRHYR LERTLNAPQA RPPILIGGSG
ENKTLRLVAE YADACNFLHG ADVRHKLGVL RAHCERLGRP YQEIEKTLHM RIPDGQSVEE
SVQHCGDLAA LGIDHVIVAV PDAAADSSQA HLAALATQIS AIIPAGR
|
|---|
| |