Gene Sros_5371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5371 
Symbol 
ID8668665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5885506 
End bp5886054 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content68% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003340877 
Protein GI271966681 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0304187 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATGACG ACGGGGTGGC CAGGTTCGAG GCCGTCTACA GGGAGACGTA CGACCAGATC 
GCGGCCTACG CCGCACGCCG CTGTGACTCT CCGCAGGATG CGGCCGATGT CGTGGCGGAG
ACCTTCACCA TTGCCTGGCG CCGGGTGGCT GATCTGCCGC CGGGGCAGGA GGCCAGGCTC
TGGCTGTACG GCGTGGCGCG CAAGGTGCTG GCCGACCACC GCCGGAGCAC AGCCCGGCAG
CGGCTGCGCA GTGTGGAGCT TGACGCCGAG ATAGCCGATC TCTACGGGGA TTCCCCCGGC
AGCAGCGTGG AGCTGAGCGT GATCGGCGCG GTGTTTCGCA GCCTGTCCGA CGACGACCGT
GAGCTTCTCT CGCTGGTCGC CTGGGAAGGG CTGGGGCGCG AGGAGATCGC CACGACGCTG
GGACTGTCCC GCAACGCCGT ACGCATCAGG TTGTATCGCG CCCGCAGGCG CTTTTCGCGC
GCACTCGACG AAGCCAGTGT CCGGTTCACA TCAGAAAGCC GGATGATTCC GGCGGGGAGG
TCGCTGTGA
 
Protein sequence
MDDDGVARFE AVYRETYDQI AAYAARRCDS PQDAADVVAE TFTIAWRRVA DLPPGQEARL 
WLYGVARKVL ADHRRSTARQ RLRSVELDAE IADLYGDSPG SSVELSVIGA VFRSLSDDDR
ELLSLVAWEG LGREEIATTL GLSRNAVRIR LYRARRRFSR ALDEASVRFT SESRMIPAGR
SL