Gene Sros_5351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5351 
Symbol 
ID8668645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5863115 
End bp5865703 
Gene Length2589 bp 
Protein Length862 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003340857 
Protein GI271966661 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.466461 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGG CGATGGGACA CCCTGGGACA GCTGAAACGG CCCTGACCAG TGGCGAGTGC 
CCTCAGGAAG TTTCCGCCGA GGTGGGACAG GGAGACAGGG GAACGGTGGC TGTGCAGCAG
CGGACGGCGA AGGCCGACCC GAAGGACGAG CTGGCCGCCC GCCTGCGCCT GCTCCAGGAG
CTGTCGGAGC GCGGAGTCCG GGCCCTCGCA CGGGACGCGG GCCTCAGCTC GTCGTCGCTT
TCGCGCTACC TCAGCGGCCA GACGGTGCCG CCCTGGCCCG CGGTGGTCGC GCTCTGCCGT
CTCCTCAAGC GCGACCCCCG CCCGCTGCGC CCCATGTGGG AACAGGCCGC GAACCCCCTG
CCGGCGCCTC CGAAGACCAG CCGCCAGGTC CAGCCCCCGT CGCCACCCGC AGGGGCTCCG
CGCCCGCCCC GCAACGATCT GCCGCGCGAC GTGCCCGACT TCACCGGACG TGAGGCCCAG
CTCGCCGCCG TGCTCGCCGC GGTGGACAGC AGCCGGGTGG TCGCCGTCGA CGGCATGGCG
GGTGTCGGCA AGACCTGTCT GGCGCTGCAC GCCGCGCACC GCCTCGCCGC CGACTATCCC
GACGCCCAGC TCTATGTGGA CCTGCACGGG TTCACCGACG GGCGGGAACC GCTCGGTCCC
GAACCCGCGC TGCGGGCCTT GCTCGCCGCC CTCGACGTGC CATCGGAAAA GATCCCGCAG
GAGGGTGGCA TCGAGCCGCT GGCGGCCTGC TGGCGGTCGG AACTTGCCGG CCGGCGGGCC
GTCGTGGTCC TCGACAACGC CGCCGGCGCC GACCAGGTCC GCCCGCTGCT GCCCGGCGCC
GGCCACTCCG TCGCCCTGAT CACCAGCCGC AACCGGTTGC TGGGCCTGGA CGAGGTGCCC
CCGGTGTCGC TGGACGTGCT GACCCCGGAG GAGAGTGCGG AGCTGCTGGC CCGCGCCAGC
GGCGATCCCG GCGGCTCCGA CGGCCGGCTG GCCCGCGACC CGGAGTCCGC GGCCGAGGTG
CTGCGGTTGT GCGGCCACCT GCCGCTGGCC CTGCGGCTGG CCGGGGCCCG GTTGCGCCAC
CGGCCGGGCT GGACTGTAGG CATCCTCGTC GAGCGTATGG CGGAGGGCGC GGGCGAGTTC
GACACCGCGC TCGCGATGTC CGTACGGCAG CTGGACCGGG CCGAGCGCCG GTTGTTCCGG
TTGCTGGGCC TGCTTCCCGG CTCGACCTTC GACGAGTACG TGGCGGCGGC ACTGGCGGAC
ATACCTCTGC GCAGCGCCCG GGCGATGCTG GAGGACCTGC TCGACGCGCA CCTCGTCCAG
CAGGCGGCGG CCGGCCGCTA CCGGTTGCAC GATCTGGTGC ACCAGCACGC GCGCCGGTCC
GCTGCCGAGC AGGACTCACC GGCGGAGCTG GAGCAGGCGC TGGGCCGGGT GCTCGACTAC
TACGTGCACG CGGCGGCCAC GGCCGACGCC GCGATGTCGT ACTTGTCTCC CAGCCGGGCG
GTCTCCGCGG GCCGCCCCCC GGCCGAGCTG CCGCGGTTCG CGGGCAAGCA CGCGGCCCTC
TACTGGTTCG TCACTGAGTA CACCAACCTG ATGGCCGTCT TCGAGGCGGC GGTCGCGGCC
GGAGCCGACG TGCACGTGTG CGAGCTGCCG CGCTTCATGC GGGCGTTCTT CGCGCGGCGC
TGTGGCACGA CGCATCTCAA CGTCCTGTTC GAGCGGTCGC TGGTCGCCGC GCAGCGCCTG
GACGATCCGC TGCAGCTGGC CGAGGCGCAC AGCGACCTGG GCTTCGCCCG GTACAACGCG
GGCCGGATGG CGGAGGCGAG TGCCGCGTAC GAGGCGGCGG CACCGCTGCT GTCCCAGGCC
GTGGACACCA GGTCCGAGGC CGAACTGACC ATGCGCCGCG GCTACCTGAG GTGGGACGAG
GGCCATGTCG AGGAGCCACT CGGCCTTTTC CGGCTGGCGG GCAAACTGTA CGCGGACGCC
GGCTGCCCGA TGGGCACGGC CCATGCGATC GCGTACGAGG CCTGGGCGAT GCTGCAGCTG
GGACACCGTG AGGAGGCGGC GCGGCTGGCC CGCGAGGCGC TGGACATCCC GCACACCGAC
CCCGCATGGC CCCCCACGCT GACGGCCCGG ATCACCCTCG GCGTGGCCAT CGCCCCCGAG
GAACCCGACG AGGCGATGGA GCACCTGGAG CAGGCGCTGG CGCTGGCCCG CGAGGACGGG
CACAAGCACA ACGAGGCGTG GTGCCTCAAC TGCCTGGGCG TCGCGCTGCG GCAGACAGGC
CGGTACGAAG AGGCGCTCGC CAGCCACCGC CAGGCGTTCG CCCTGCTGGA CGAGCTGTTC
GAGGAACATT GGAAGATCCA TTTCCTCAAC GGCTACGCCG AGACCTGCCG GCTGGCGGGC
CTGCCCGAGG AGGCCCTGCG GCTGCACCGG CAAGCGCTGG AGCTGGCCCC GAGACTCGGG
TACCGGTACG CGGAGGCGCT GGCCCACGAG GGAATCGCCG GCGTCCTCGA CGAGACGGAC
CCGCCCGCAG CCGCCGAACA CCGCGCGGCC GGGCAGGCCA TCGTGCAGGA GCTCAAACCA
GGCGCCTGA
 
Protein sequence
MTTAMGHPGT AETALTSGEC PQEVSAEVGQ GDRGTVAVQQ RTAKADPKDE LAARLRLLQE 
LSERGVRALA RDAGLSSSSL SRYLSGQTVP PWPAVVALCR LLKRDPRPLR PMWEQAANPL
PAPPKTSRQV QPPSPPAGAP RPPRNDLPRD VPDFTGREAQ LAAVLAAVDS SRVVAVDGMA
GVGKTCLALH AAHRLAADYP DAQLYVDLHG FTDGREPLGP EPALRALLAA LDVPSEKIPQ
EGGIEPLAAC WRSELAGRRA VVVLDNAAGA DQVRPLLPGA GHSVALITSR NRLLGLDEVP
PVSLDVLTPE ESAELLARAS GDPGGSDGRL ARDPESAAEV LRLCGHLPLA LRLAGARLRH
RPGWTVGILV ERMAEGAGEF DTALAMSVRQ LDRAERRLFR LLGLLPGSTF DEYVAAALAD
IPLRSARAML EDLLDAHLVQ QAAAGRYRLH DLVHQHARRS AAEQDSPAEL EQALGRVLDY
YVHAAATADA AMSYLSPSRA VSAGRPPAEL PRFAGKHAAL YWFVTEYTNL MAVFEAAVAA
GADVHVCELP RFMRAFFARR CGTTHLNVLF ERSLVAAQRL DDPLQLAEAH SDLGFARYNA
GRMAEASAAY EAAAPLLSQA VDTRSEAELT MRRGYLRWDE GHVEEPLGLF RLAGKLYADA
GCPMGTAHAI AYEAWAMLQL GHREEAARLA REALDIPHTD PAWPPTLTAR ITLGVAIAPE
EPDEAMEHLE QALALAREDG HKHNEAWCLN CLGVALRQTG RYEEALASHR QAFALLDELF
EEHWKIHFLN GYAETCRLAG LPEEALRLHR QALELAPRLG YRYAEALAHE GIAGVLDETD
PPAAAEHRAA GQAIVQELKP GA