Gene Sros_5276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5276 
Symbol 
ID8668570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5794100 
End bp5795413 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003340788 
Protein GI271966592 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0692184 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGTCG ATCAGCACAT GAGCCGGGTG CCCGACTACA CCGCGTTCCC GACCGTGGAC 
CAGATGCACG CCGAGCTCGA CGAGCTCGCC GCCGCCCACC CCGGCCTGGT ACGGCTGCGG
CGCATCGGCA CCTCGCGCCT GGGTGAGCCG CTGCGCGTGG CGACCATCGG CTCCGGCCCC
CACGACGCCG TGATCATCGG CGGGCCGCAC CCCAACGAGC CCATCGGCTC GCTCACCGTC
AGCAGCCTGC TGCGCCGGCT CGTCGAGGAC GCCTCGCTGC GCGAGGACTT CGGCTACCGC
TGGCACCTCA TCCCGTGCGT CGATCCCGAC GGGGCCCGGC TCAACGAGGG GTGGTACGTA
CGGCCGGGCG ACCGCCGCGC CTACGCTGAA CACTTCTACC GCCCCGCCGA AGCCGACCAG
GTCGAATGGA CCTTCCCACT GACCGGCGAG GACTACTTCT TCGACCGCAC GCTGCCCGAG
ACCGAGGCGC TGATGCGGCT GATGGACGAG GTCAAGCCCG CCTTCGTCTA CTCCCTGCAC
AACGGCGAGC TCCAGGGGGC GTTCTACTAC CTCAACAGGG ACGAGCCCGC GCTCGCCGCC
CGCCTGGCCG CCATCGCGAC CGCCCAGGGC CTGCCCCTGC ACATGGGGCC GCCGGAGGTG
CCGAGCGCGG TCCCGATCGG CCCCGCCGCC TACCGGACCC CGAGCGGCGC CGAGCTGGGG
GCGATCTACG GCACCGGCGG CGGGAGCGTC GACTACGCCA ACCGCTTCGA CGCCCTGCAC
CTGGTCACCG AGCTGCCCTA CTGGGCCGAC CCCCGCGTCG CCGACGAGAC CCCCACCGAC
CAGGGGTACG GCGAGGCGAT CCAGGCCGGC CTCGCCGCGC AGCGCGCCCT GATCGCCGAA
CTGACGCAGT CCATGTCGGC GGTCAGGGCC GACCTGACCG TGCGCTCGCC GTTCCGCCTC
GCTCTGCAGG ACTTCCTTGA CACCCACGAC GAGTTCATCT CCGAGTGGGA GTCCTTCCCC
GGCACGGACC GGCGCGCCAC GGTGGCCGAG GTGGTCGGCA ACCGGCAGCT CGTGCACATC
ATGCGGCTGA GGTACAGCGG GACCTGTCTG CGCATGCTGG ACGCCGAACT CGGCGCGGGC
AACCGGACCC CCGCCATCCG GGCCGAACGG GCCCGCCTCG GCGCACGATT CGACGACTGG
TTCACCGAGG CCGAAGCCGA CGCGACGGCC ACCCCGATCC CGATCCGCAC GCTGGTCGCC
GTACAGCTCG GAGCGGCCCT GCTCGCGGCG GAGTCGGCCA AGCGGAAGCC CTGA
 
Protein sequence
MDVDQHMSRV PDYTAFPTVD QMHAELDELA AAHPGLVRLR RIGTSRLGEP LRVATIGSGP 
HDAVIIGGPH PNEPIGSLTV SSLLRRLVED ASLREDFGYR WHLIPCVDPD GARLNEGWYV
RPGDRRAYAE HFYRPAEADQ VEWTFPLTGE DYFFDRTLPE TEALMRLMDE VKPAFVYSLH
NGELQGAFYY LNRDEPALAA RLAAIATAQG LPLHMGPPEV PSAVPIGPAA YRTPSGAELG
AIYGTGGGSV DYANRFDALH LVTELPYWAD PRVADETPTD QGYGEAIQAG LAAQRALIAE
LTQSMSAVRA DLTVRSPFRL ALQDFLDTHD EFISEWESFP GTDRRATVAE VVGNRQLVHI
MRLRYSGTCL RMLDAELGAG NRTPAIRAER ARLGARFDDW FTEAEADATA TPIPIRTLVA
VQLGAALLAA ESAKRKP