Gene Sros_5253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5253 
Symbol 
ID8668547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5765260 
End bp5766504 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content71% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003340765 
Protein GI271966569 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.409855 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGACCC AGGAAGCGTC CCCCCTCCCC CACCCCGCGC GGCTTCCCTC GCTGACCGGC 
CTTCGGTTCC TGGCGGCAGC CCTGGTGTTC CTGTTCCACA GCAGCATCGC GCAGGTGTTC
AGCGCTCCGC CGCTGCGCTA CGGCTTCCTC TTCGTCGCCG GCGGCGGAGG ATTCGTGGGG
GTCTCCTTCT TCTTCGTCCT GAGCGGATAC GTTCTCACCT GGTCGTCGCG TCCGGGGAGC
AGGCCGGCGG GGTTCTGGCG AAGGCGCTTC GTCAAGATCT TCCCCAACCA TGTCGTGACG
TTCGTCATCG CGCTTGTCCT GATCAGCTGG GCGGGAGAGT CCAGCGGTCT GTGGCAGAGC
GTGACCAACC TTCTCCTGCT GCACGCCTGG ATCCCCGAAT ACTCCTACAT GGTCAGCGTC
AACGCCGTGA GCTGGTCGCT CTCGGCGGAG GCCCTGTTCT ACCTCGCCTT CCCGCTGCTG
AGCACGGTGG TCGGCCGGAT CAGGCCGGGC CGCCTGTGGT GGTGGGCGGG GGCGGCGATC
GTGGGGGTGG TGCTGGCGCC GCCGGCCGTC CAGGCGCTGC TGCCGGACCA GCCGCAGTGG
TCATGGGGGC CGGCCTCCTT CACCCAGATC TGGTCCGTCT ACGCCTTCCC CCCCGTGCGG
CTCCTGGAGT TCGCCCTGGG CATGCTGCTC GCGCGGATCG TGCTGACCGG CCGGTGGATC
CGCCTTCCCC TGCCGGCGGC CTTCCTTCTG GTGCTGGCCG GCTACGGGGC CTCGCTGTTC
GCCCCGTTCC TCTACCGGTT CGCGGCATGC ACCGTGATTC CCCTGGCGCT GCTGATCCCG
GCCGCCGCCG CCGCAGACGT CCAGGGCCGC AGGACGGTGC TGAACACCCG GGTGATGGTC
TGGCTCGGCG AGATCTCCTT CGCCTTCTAC CTGGTGCACG GGCTGGTACT CGCCTACGGA
CATCGGGCGT TCGGCCCGCC GACGAACGCG TTCTCCTCCG GGCCGGCCTG GAGCACCCCG
GTCGGGCTGG GCTTCCTGCT GGCCTGCTTC ACGGTCGCGG TCCTGCTCTC CTGGGCCCTG
CACGTCCTGG TCGAGCGCCC CGCGATGCGC CGCTGGGCGA GCCGGTCCGC CGCACCGGCC
CCTGCGCCGG CACCGGACGA CGGATCCCAG GTGCTGCCGG AGGGCGTCAT CGGGCCGCGG
GCGGGGAGCC GGCCGGAGGG CGACGGCAGC GCGGCCGACG CCTGA
 
Protein sequence
MSTQEASPLP HPARLPSLTG LRFLAAALVF LFHSSIAQVF SAPPLRYGFL FVAGGGGFVG 
VSFFFVLSGY VLTWSSRPGS RPAGFWRRRF VKIFPNHVVT FVIALVLISW AGESSGLWQS
VTNLLLLHAW IPEYSYMVSV NAVSWSLSAE ALFYLAFPLL STVVGRIRPG RLWWWAGAAI
VGVVLAPPAV QALLPDQPQW SWGPASFTQI WSVYAFPPVR LLEFALGMLL ARIVLTGRWI
RLPLPAAFLL VLAGYGASLF APFLYRFAAC TVIPLALLIP AAAAADVQGR RTVLNTRVMV
WLGEISFAFY LVHGLVLAYG HRAFGPPTNA FSSGPAWSTP VGLGFLLACF TVAVLLSWAL
HVLVERPAMR RWASRSAAPA PAPAPDDGSQ VLPEGVIGPR AGSRPEGDGS AADA