Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5248 |
Symbol | |
ID | 8668542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 5760914 |
End bp | 5761597 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | putative transcriptional regulator, TetR family |
Protein accession | YP_003340760 |
Protein GI | 271966564 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.66171 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCGCA GAGCTCCCCG GCACGCAGAA GCCGAACGCA ACGACCAGGC CCTCCTGGAG GCCGCCAAGA AGGTCCTGGC TGTGGACGGA GCGCATGCAT CGGTGGCGAC GATCGCCGCA CGCGCCGGAG TCGGCATCGC CAGCCTCTAC CGCCGCTACC GCTCCAAGGA CGAGCTCTTC CAGCACCTGT GCGCGCTGTC GCTCGACCAG TGGATCCAGG CCGCCGAACG CGGCCTGAAG CACGACGACC CATGGGAAGG GCTCGCTCAC TACATCGGCG CCTGCATCGA GTTCAGCGGC GGCTCCCTCG GGCCGCTGGC CGGCACGATC GCCGTCACCG ACGAGATGGC GGCCAAGTTC ACCAGGTCCG ACGAGCTGAT GCGAGACCTG GTGACCCGCG CGCACGCCGC CGGAGTGCTC AGATCGGACG CCACGGCCAT GGACATCTCG CTACTGATCG AACAACTCGG CAAGTCCCCC CTGATCGAAC AACTCGACAG GCAGGGCCGT ACCGACCTGA TCGACGCAGC CCACAACGCC CGAAAGCGCA CGATCGCCAT CGCTCTCGAC GGCCTGCGCT CCGGCCGCCC CCAATTGCCC GGGACCGCAC CCACTCCCGC CCTCCTCGCC GAACGCTGGG AGCACGCCCC CGCAGACTCG ACGAGGTCGC CAGGACGGCC GTAG
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Protein sequence | MARRAPRHAE AERNDQALLE AAKKVLAVDG AHASVATIAA RAGVGIASLY RRYRSKDELF QHLCALSLDQ WIQAAERGLK HDDPWEGLAH YIGACIEFSG GSLGPLAGTI AVTDEMAAKF TRSDELMRDL VTRAHAAGVL RSDATAMDIS LLIEQLGKSP LIEQLDRQGR TDLIDAAHNA RKRTIAIALD GLRSGRPQLP GTAPTPALLA ERWEHAPADS TRSPGRP
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