| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_5189 |
|---|
| Symbol | |
|---|
| ID | 8668483 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 5705110 |
|---|
| End bp | 5705895 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | gluconate 5-dehydrogenase (5-keto-D-gluconate 5- reductase) |
|---|
| Protein accession | YP_003340708 |
|---|
| Protein GI | 271966512 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.00846982 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAA AGACTCCGGC CCATCGCGCC GGCACCGACC TGAACGGACA CGTCGCCATC
GTCACCGGCG GCTCCTCCGG TCTGGGCCAC GCCATCGCGC TCGCCCTCGC GGAGGCCGGC
TCGACGGTCG CGCTCGTCAG CCGGCGGCGG GAGGCCGGCG AGCGGGCCGC AGCCCGGATC
GCATCCCTCA CGGGCCGGGC GGCCTCGGCG CTGGCCTGCG ACGTCAGCGA CGAAGACGGC
GTCCACCGGG CGGTGGGCGA GGTGGCCGAG CGATTCGGCC GCCTGGACAT CCTGGTGACC
AGCGCGGGGA TCCAGGCCAG AGGCGACATC GGCGAGCTCG GCGCGGCCCA GCTCCGGCGC
TGCCTCGAGG TCAACGTCGT CGGGACCTTC CTGGCCTGCC AGGCGGCCGT CCCGTTCATG
CGAGCCGCGG GATACGGGCG CATCGTCACC CTGGCCAGCG CGCTCGGCCT CGTGGGCGCC
GCAGGCCGGG CCGGCTACGC CGCCAGCAAG GGCGCGGTCG TCCAGCTGAC CCGGAGCCTG
GCGGCCGAAC TGGCCGGCAC CGGCATCTGC GTCAACGCAC TCGCGCCCGG CCCGTTCCGC
ACCCCGCTCA ACGAGGGCGC CGACGACGAC CCCCGCGTAC GCGACTTCCT CGACCACCAG
GTGCCGGTGG GCCGGTGGGC CCAGCCCAGC GAGCTGACCG CCGCCGCGCT GCTGCTGGCC
GGTCCCGCCG CGTCCTACAT CACCGGCGCG ATCCTCCCCG TCGACGGCGG CTGGACCGCC
CACTGA
|
|---|
| Protein sequence | MTEKTPAHRA GTDLNGHVAI VTGGSSGLGH AIALALAEAG STVALVSRRR EAGERAAARI
ASLTGRAASA LACDVSDEDG VHRAVGEVAE RFGRLDILVT SAGIQARGDI GELGAAQLRR
CLEVNVVGTF LACQAAVPFM RAAGYGRIVT LASALGLVGA AGRAGYAASK GAVVQLTRSL
AAELAGTGIC VNALAPGPFR TPLNEGADDD PRVRDFLDHQ VPVGRWAQPS ELTAAALLLA
GPAASYITGA ILPVDGGWTA H
|
|---|
| |