Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5180 |
Symbol | |
ID | 8668474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 5694357 |
End bp | 5696504 |
Gene Length | 2148 bp |
Protein Length | 715 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | Superfamily I DNA and RNA helicase-like protein |
Protein accession | YP_003340699 |
Protein GI | 271966503 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00292486 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAAACCCC TGACCACCAG CGCGTTTGAC CTTCCCGGCC ACCTCACCCC CAAGGCCGAC CCGACGCTGA TCGCCGGTGA CGAGCAGCAC TTCGCGGCCA TCGCGGAGAG CCTCGAGCAG TCGATCGCCG ACCTGTCCGA CCGCCTCGAC GCCGAGCGCA AGGCACCCGG CGGAAGAGGC CGGCAGGTGA TGGACCGGGA CATGGAGATC CACCGGCTGA CCGCTCGCCT GCGCGCGCTG CGTCGCTTCG GTCTGGACCT GTGCCTCGGG CACATCGTCA GCGCGGACAA CCCCGAGCCC GTGTACGTCG GACGGCTTGG CCTCACGGAC AGCGCGGGTC GCCGGCTGCT GCTCGACTGG CGCTCCCCCG CGGCCGAGCC GTTCTTCGGA GCGACCCACG CCAACCCGAT GGGTCTGGCA AGCCGCCGCA GGTATCGCTG GACCCGCGGC CGGATCAGCG ACTACTGGGA CGAGGTGTTC ACCTCGGACG GGTTCGAAGG GCACGCCGCG CTCGACGACC AGTCCGCCTT CATCGCCAGC CTGGGCAGCA ACCGGTCGCC CCGGATGCGG GACGTGCTCG GCACCATCCA GGCCGACCAG GACGCCATCA TCCGCGCGGG ATCCCGCGGC GCTCTCGTCG TCGACGGCGG TCCGGGGACG GGGAAGACCG TCGTCGCGCT GCACCGCTCC GCCTACCTCC TCTACTCCGA CCCCCGCCTC GGTCACCGCC GGGGCGGCGT GCTGTTCGTC GGTCCGCACC AGCCCTACCT GGCCTACGTC GCCGACGTCC TGCCCAGCCT CGGCGAGGAG GGCGTGCAGA CCTGCACCCT GCGCGACCTC GTCCCCGAGG GAGCCGGGGC GGCGATCGAG ACCGATCCGG ACGTGGCTCG CCTGAAGTCG TCGGCGGACC TGGTGAAGGC GATCGAGCCC GCCGTCAGGT TCTACGAGAA CCCGCCCACC AAGGGGATGA CGGTCACGAC CCACTGGTCC GACGTCTGGC TGGGCGCCGA CGATTGGGCC GAGGCGTTCG GAGCACCGGA TCCCGGCACT CCGCACAACG ACGCGCGCGA CCGGATCTGG GAGGAACTGC TCACGATCCT GATGGACAAG CACGACGACG ACGTCCCGGC TCACCTGCTC CGCAAGTCGC TGCTGCAGAA CAGCGAGTTG CTCACGGTCT TCAACCGCGC GTGGCCGCTG CTCGAAGCGA CCGACCTCGT CGGCGACCTG TGGTCGGTAC CCGCCTACCT GCGCAAGTGC GCCCCCGGGC TCAGCGTCGA CGACGTACGG CGACTGCAGC GCGCGGACGC CCAGGCCTGG ACGGTGTCCG ACCTGCCGCT CCTGGACGCG GCACGGCAGC GGCTCGGCGA CCCGGAGGCG TCACGACGTA AGCGCCGGCA GGAAGCCGCT CTCGCCGCCC AGCGCGAGCG CATGGCCCAG GTCGTCGACG CCCTGATCGA GGCCGATGAC GACGGCGAAG GCCTCGTGAC ACAGCTGCGC CGAGAGGACC TCCAGCGAAA TCTGGTCGAC GAGTCCGAGC TGCCCACCCT CGACCCGGAC CTGCTGGCCG GCCCGTTCGC GCACATCGTC GTCGACGAGG CTCAGGAACT GACCGACGCG GAGTGGCAGA TGTTGCTGCT CCGGTGCCCG TCCCGGAGCT TCACCATCGT CGGGGACCGC GCCCAGGCCA GGCGCGGGTT CACGGAGTCA TGGCAGGAAC GGCTCGAGCG GATCGGGCTC GACCGGATCA ACCTGGCGTC CCTGAGCATC AACTACCGGA CGCCGGAAGA GGTCATGGCG GAAGCCGAGC CGGTCATCCG GGCCGTGCTC CCGGACGCCA ACGTGCCGAC CTCCATCCGC AGCAGCGACG TCCCCGTCGT ATACGGATCC GCTGCGGATC TGGGCTCGGT CCTCGACACC TGGCTCGCCG CGCATGCCGA CGGGATCGCC TGCGTCATCG GCGATCCCAC GTTCCGGTCG ACGTCCCGTG TCCGGTCGCT GACCCCGGAG CTGTCGAAGG GGCTCGAGTT CGACCTGGTC GTCCTCATCG ATCCGGAGGC GTTCGGCGAG GGCGTCGAAG GAGCGGTCGA CCGCTATGTC GCGATGACCC GGGCGACCCA GCGACTCGTC ATCCTCACGA GCTCCTGA
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Protein sequence | MKPLTTSAFD LPGHLTPKAD PTLIAGDEQH FAAIAESLEQ SIADLSDRLD AERKAPGGRG RQVMDRDMEI HRLTARLRAL RRFGLDLCLG HIVSADNPEP VYVGRLGLTD SAGRRLLLDW RSPAAEPFFG ATHANPMGLA SRRRYRWTRG RISDYWDEVF TSDGFEGHAA LDDQSAFIAS LGSNRSPRMR DVLGTIQADQ DAIIRAGSRG ALVVDGGPGT GKTVVALHRS AYLLYSDPRL GHRRGGVLFV GPHQPYLAYV ADVLPSLGEE GVQTCTLRDL VPEGAGAAIE TDPDVARLKS SADLVKAIEP AVRFYENPPT KGMTVTTHWS DVWLGADDWA EAFGAPDPGT PHNDARDRIW EELLTILMDK HDDDVPAHLL RKSLLQNSEL LTVFNRAWPL LEATDLVGDL WSVPAYLRKC APGLSVDDVR RLQRADAQAW TVSDLPLLDA ARQRLGDPEA SRRKRRQEAA LAAQRERMAQ VVDALIEADD DGEGLVTQLR REDLQRNLVD ESELPTLDPD LLAGPFAHIV VDEAQELTDA EWQMLLLRCP SRSFTIVGDR AQARRGFTES WQERLERIGL DRINLASLSI NYRTPEEVMA EAEPVIRAVL PDANVPTSIR SSDVPVVYGS AADLGSVLDT WLAAHADGIA CVIGDPTFRS TSRVRSLTPE LSKGLEFDLV VLIDPEAFGE GVEGAVDRYV AMTRATQRLV ILTSS
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