Gene Sros_5116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5116 
Symbol 
ID8668410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5630287 
End bp5631009 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content65% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003340642 
Protein GI271966446 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.522329 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.161919 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCTC AGCTTGTTGC GCTCTGCTTC GATGCGAACG ACCCGCTCCG TCTCGCGCGC 
TTCTGGGCCG GAGTCCTGGG CTGGGAGATG GCCAACGACC CCCACGACGG CATCGTGCTC
CTGCCGAGCG ATGACACCAG GTTCCGGATC CGATGTCTTC CGACCCAGGA GAAGAAGACC
GGCCAGAACC CGATGCACTT CGATCTGACG AGCACGTCCC TTGAGGACCA GCAGCAGACG
GTGGAGAGGT CGCTTGCACT CGGTGCGCGG CACATCGACA TCGGGCAACG CCCGGAGGAG
GGGCATGTGG TGCTCGCCGA CCCCGAAGGC AACGAGTTCT GCGTCATCGA GCCGGGCAAC
AACTTCCTCG CTGACTGCAG ATTCATCGGA GCGCTCGCGT GTGACGGTTC GCAGGAGGTC
GGCTACTTCT GGAGCGGGGC GCTGGGCTGG CCGTTGGTCT GGGACCAGGA CCAGGAGACC
GCGATCCGAT CGCCGCACGG CGGTCCGAAG ATCACATGGG GCGGTCCGCC ACTGATGCCG
AAGACGGGGA AGAACAGGCT GCACTTCGAC CTCGCGCCAC CTGTGCATGG TGATCGGCAA
GCGGAGGTCG ACCGTCTCGT CTCCCTCGGA GCGACTCGAA TCGACATCGG CCGGCGCGGG
GGCAGCCGGG TGGTGATGGC CGATCCTGAT GGCAATGAGT TCTGTGTGTT GACCCCCCGA
TAG
 
Protein sequence
MTSQLVALCF DANDPLRLAR FWAGVLGWEM ANDPHDGIVL LPSDDTRFRI RCLPTQEKKT 
GQNPMHFDLT STSLEDQQQT VERSLALGAR HIDIGQRPEE GHVVLADPEG NEFCVIEPGN
NFLADCRFIG ALACDGSQEV GYFWSGALGW PLVWDQDQET AIRSPHGGPK ITWGGPPLMP
KTGKNRLHFD LAPPVHGDRQ AEVDRLVSLG ATRIDIGRRG GSRVVMADPD GNEFCVLTPR