Gene Sros_5111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5111 
Symbol 
ID8668405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5625727 
End bp5626515 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content69% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003340639 
Protein GI271966443 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0663531 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGAAG TACGCCTGCG CGCTCAGGAC CTGGAATTGC GCTACGCCGA CCGCGTGGTC 
TCGACGCGGC TCAACCTGGA TGTGCCCGAC GGCTCGTTCA CCGCGATCGT AGGCGCCAAC
GCATGCGGGA AGTCGACCTT GCTGCGCGCG CTCGTCCGGC TGCTGAAGCC GGCTGAAGGC
CAGGTGCTGC TCGACGGCCG GGACGTCGGC TCGTACGCCG CCAAGGCGCT CGCGCGGTCC
CTGGGCTTCC TGCCTCAGGA ACCTCTGGCG CCGGAGGACA TCAAGGTCCG GCAGCTCGTC
GGACGCGGCC GGTTCCCGCA TCAGCCGCTC CTGGCGCTCT GGTCGGCGGA GGACGAGAGC
GCGGTGGCTG AGGCCATGGT CACCGCGGGC GTCGAGAATC TCGCGGACAG GGCTGTGAAC
GAGCTGTCGG GAGGGCAGCG GCAGCGGGTG TGGGTGGCCA TGGTGCTCGC CCAGCGCACG
CCGTACCTGC TGCTCGACGA GCCGACGTCG TTCCTGGACA TCGCGCACCA GTACCGGCTG
CTGGCCCTGC TCGCCCGGCT GCGCGAGCAG GGCCGTACCG TCGTGGCCGT CCTGCATGAC
ATCAACCAAG CGTGCAGGTT CGCCGATCAT CTGATCGCGA TGAAGGACGG CCGGATCGTC
GCCGAGGGCG CCGCCGCGGA GATCGTGGAC GCCGCACTGG TCAAGGAAGT CTTCGACCTG
CCTGCCGTTG TGGCGCCCGA CCCGGTGACC GGAACGCCGA TGATCGTCCC CACCCTTGAC
ATCCACTGA
 
Protein sequence
MTEVRLRAQD LELRYADRVV STRLNLDVPD GSFTAIVGAN ACGKSTLLRA LVRLLKPAEG 
QVLLDGRDVG SYAAKALARS LGFLPQEPLA PEDIKVRQLV GRGRFPHQPL LALWSAEDES
AVAEAMVTAG VENLADRAVN ELSGGQRQRV WVAMVLAQRT PYLLLDEPTS FLDIAHQYRL
LALLARLREQ GRTVVAVLHD INQACRFADH LIAMKDGRIV AEGAAAEIVD AALVKEVFDL
PAVVAPDPVT GTPMIVPTLD IH