Gene Sros_5064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5064 
Symbol 
ID8668358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5589388 
End bp5590299 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content72% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003340597 
Protein GI271966401 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.728753 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.6022 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCGA CCCCACCCCA CGCGACCGGC GACGCCGTCA CCGAGCAGTT CCTCGGTTAT 
CGCGAACTGC TGTTCTCGGT GATCTACAAC ATGCTCGGCA GCGTCGCCGA CACCGAGGAC
GCGCTGCAGG AGGTATGGCT GGCCTGGTCC GCCCGGCAGC GCAAGCCGGA CGCCGGACCA
GTCGAGAACG CCCGGGCCTA CCTGGTGCGG ATCGCGGTGA ACCAGGCGCT CGCCCGCCGC
GCGGACATGA GCCGCCGGCA GGAGACCTAC GTCGGCCCGT GGCTGCCGGA ACCGCTGATC
ACCGCTGAGG ACGACGTCGC CGTCGCCGCC GAGCGCGCCG AATCGTTGTC GATGGCGATG
CTGGTGGTGC TGGAGACCCT GTCACCGCTG GAACGGGCGG TGTTCGTGCT GCACGAGGTG
TTCGGCTTCG GCCATCCGGA GATCTCCGAC ATCCTCGGCC GCTCGCCGGC GGCGGTCCGC
CAGCTCGCGG CCCGCGCGCG CCGCCACGTT CATGCGCGCC GCCCTCGCCA CCGGACCGAG
CCGGACATCC ACGCCCAGGT CACCGAGCGG TTCGCCGCGG CCGCCCTCGG CGGTGACCTG
CAGGCCCTGC TCGAGGTGCT GGCACCGGAC GTGACATTGT GGACCGACGG CGGAGGCAAG
GGACCCGCCA CCAGCCTGCG TCCCGTACGC GGCCGCGACC GGGTCGCCGC GCTGTTCATG
TCCGTCGCCG CGACGCTGCC CGCCGACGGG CTGGACATCC GTTACCAGCG TATGGCCGGC
GACCCGTGCG CGCTCGTCTT CTCCGGGGAC AGCCCGCTCG CCGTGGTCGT CGTGGATCTC
ACGCCCGGCG GCGACCGGGT CGCCGGCATC TACTCGGTCA CCAATCCCGA CAAACTCACC
GGGATCCGCT GA
 
Protein sequence
MTSTPPHATG DAVTEQFLGY RELLFSVIYN MLGSVADTED ALQEVWLAWS ARQRKPDAGP 
VENARAYLVR IAVNQALARR ADMSRRQETY VGPWLPEPLI TAEDDVAVAA ERAESLSMAM
LVVLETLSPL ERAVFVLHEV FGFGHPEISD ILGRSPAAVR QLAARARRHV HARRPRHRTE
PDIHAQVTER FAAAALGGDL QALLEVLAPD VTLWTDGGGK GPATSLRPVR GRDRVAALFM
SVAATLPADG LDIRYQRMAG DPCALVFSGD SPLAVVVVDL TPGGDRVAGI YSVTNPDKLT
GIR