Gene Sros_4632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4632 
Symbol 
ID8667926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5152567 
End bp5153994 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content69% 
IMG OID 
Productputative transmembrane efflux protein 
Protein accessionYP_003340232 
Protein GI271966036 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAGCA CTGACACCGC AACTCAGCGG GCAAGGCCGC ATACCGGCTC CGCCTGGATG 
ATCCTGGCGC TGGCGTGTGC CTGCCAGTTC ATGGTCATCC TGGATTCGTC CATCGTTAAC
GTCGCCTTGC CCTCAGTCCG CGAGGACCTC GGCTTTACAC CCACCGGCCT GGCCTGGGTG
GTGAACGGCT ACCTGCTCGC CTTCGCCGGC TTCATGCTGC TGGGTGGCCG CGCCGCTGAC
CTGTTCGGCC CGCGCCGGAT GCTGGTCGCC GGGCTGTTGT TGTTCTCCGC CACGAGTCTG
GCCGGGGGCC TGGCAACCGC TCCGGAGGTC CTGGTGGCAG CCCGACTCGC GCAGGGCATC
GGAGCCGCCA TGATGGCCCC GGCGACGCTG GCCGTGATCA ACACCTCCTT CACCGAGCCG
AACGCGCGTG CCAAGGCGTT CGGCGCATGG TCTGCCGCGG GCGGTGTGGG CGGGATGGTC
GGCGCGGTCG CGGGCGGTGC CATCACCACC GGCCTGTCGT GGCGGTGGGT CTTCCTCATC
AACGTGCCGA TCGGTGCGGT GCTGATCGTC GTGGCCATGA TGTCGCTGGC TGGCACGCGA
ATCGGCCGGC GAGAATCGCT TGACCTCACT GGCGCGGTCA CGGGGACGGC AGGGCTGGCC
GCGCTGATCT ACGGGGTCAT GCAGAGCGCC GATCATGGCT GGTCGTCCGG GCTGGTCGTC
GGGCCAGCCG TGGCGGGCCT GCTCCTGCTC GTCGTCTTTA CCGTGGTGGA GGCGCGTTTC
GCCTCCCTGC CGATGGTGCC CCTGAGGCTG TTCAAGATCC GGGGGGTGGC CGTCGGCAAT
GTCATGCTGC TGCTGTTCGG TGGAATTGCC ATCGCGATGT GGTATTTCAC GTCGCTGTTC
CTGCAGAACG TACTCGGCTT CAGTGCGCTT CAAGCCGGGC TCGGGCAGAC ACCCGCGGCG
GTGATGTTCA TGGTGATCGC GCGATGGGCC GCCGCCCTGC TGCCGCGAAC CGGTGTGCGC
CCCCTGGTGC TGGCTGGCAG CGCCTGTTTC CTGGCCGGTT TCGGCTGGCT CTCCCTAGCC
CACGCCGACA GCGGCTACGT CGCCAGCGTG CTCGGGCCTA CGCTGCTCAT CGCTGTCGGT
ATTGGGCTGA CCTTCCCCAC CCTGATGGCC GCGGCGACCG CCGACGGTCC TGAGGGCGAC
GCGGGGATCA TCGGTGGCCT GGCCCAAACC GCCAGTCAGG TAGGCGGGTC GGTGGGCCTG
GCGGTGCTCG CGACGGCCGC CAGTGCCAGA GCCGCGTCGG AGGCCGGCGG GAGTTCCTCG
CCCGCCGCCC TCGCCGTCGG CTACGACCTG GTCTTCCTCA TGGCGGCCGG GCTCGGCCTG
GCCATCGCGG TGGTCAGCTT GCTGCTGCCG CGGCACCGGC GCGGCTGA
 
Protein sequence
MTSTDTATQR ARPHTGSAWM ILALACACQF MVILDSSIVN VALPSVREDL GFTPTGLAWV 
VNGYLLAFAG FMLLGGRAAD LFGPRRMLVA GLLLFSATSL AGGLATAPEV LVAARLAQGI
GAAMMAPATL AVINTSFTEP NARAKAFGAW SAAGGVGGMV GAVAGGAITT GLSWRWVFLI
NVPIGAVLIV VAMMSLAGTR IGRRESLDLT GAVTGTAGLA ALIYGVMQSA DHGWSSGLVV
GPAVAGLLLL VVFTVVEARF ASLPMVPLRL FKIRGVAVGN VMLLLFGGIA IAMWYFTSLF
LQNVLGFSAL QAGLGQTPAA VMFMVIARWA AALLPRTGVR PLVLAGSACF LAGFGWLSLA
HADSGYVASV LGPTLLIAVG IGLTFPTLMA AATADGPEGD AGIIGGLAQT ASQVGGSVGL
AVLATAASAR AASEAGGSSS PAALAVGYDL VFLMAAGLGL AIAVVSLLLP RHRRG