Gene Sros_4583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4583 
Symbol 
ID8667877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5097859 
End bp5098461 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content72% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003340188 
Protein GI271965992 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.181423 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.302497 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGAGA AACCGGGACT GCGGGAGCGC AAGAAGCAGC GCACCCGGCA GGCGTTGATC 
GAGGCGGCGG TGCGCCTGTT CGAGGACAGG GGCTACGACC AGGTGACCGT GGCCGAGATC
GCCGGCGCCG CGGAGGTGTC CCCCCGCACC TTCTTCCTCC ACTTTCAGAC CAAGGAGGAC
GTGCTCCTGG CCAACGCCGA CGTGCGCGTC GATCTGGCAC TGGAGGCGAT CGCCGAGCGC
CACGCCGGGG AGCCGCTGTC CGGAGTGCTG GTGCGGGCGA CGGAACAGAT GATCTTCAAT
GCCTGGGATC ACGACCTGCC CAGCGGCCTC GCGGCGCTTC GGGCGCGGCT GGCGGCCTCG
GAGCCGGCGC TGCAGGCCCG GCTGCTGCAG CGCTACCTCA CCGCTCAGGC CGAGCTGGCC
CAGGCGCTGC AGCGGGCGTT CCCCGACAGG CTCGACACGA CCACCGCCCC CGCCCTGGTC
GGCGCGATGG TGGGCGCGGT CAGCGCGTCC GCGGTGAGCG CGCTGCAGCG CGGCGACGGA
CCCGACGAGG TACGGAACGC CATGCGGCAG GCCATGGCCC TGGTGGCGCG ATCCGTCACC
TGA
 
Protein sequence
MVEKPGLRER KKQRTRQALI EAAVRLFEDR GYDQVTVAEI AGAAEVSPRT FFLHFQTKED 
VLLANADVRV DLALEAIAER HAGEPLSGVL VRATEQMIFN AWDHDLPSGL AALRARLAAS
EPALQARLLQ RYLTAQAELA QALQRAFPDR LDTTTAPALV GAMVGAVSAS AVSALQRGDG
PDEVRNAMRQ AMALVARSVT