Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_4558 |
Symbol | |
ID | 8667852 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 5074848 |
End bp | 5075738 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003340164 |
Protein GI | 271965968 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.125651 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.119283 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACAGTTG ATGCGGTTGA GGACTTCGAG CGGCACCGCT CGAAGTTGTT CGGGTTGGCC TATCGGATGC TGGGTTCGGC TGAGGAGGCC GAGGACGTCG TCCAGGACGC CTTCCTGCGT TGGCATCAGG CGAGCGCTGT CGAGTCGCCG TGGGCGTGGC TGGCCAAGGT CGCCACCAAC CTGTGCGTGA ACCGGTTGAC GTCCGCTCGT GCGCGCCGGG TGAGCTATGT CGGTTCCTGG CTGCCGGAGC CGGTGTTGAC CGCGGGCGGC GCTTTGGGCC CGCTGGACAG CGCCGAGCAG CGGGAGTTCG TCTCGCTGGC CTTCCTGGTG CTGCTGGAAA GGCTTAACCC GGTGGAGCGC GCGGTGTTCG TCCTGCGCGA AGCCTTCGAC TACAGCCATC GGGAGGTGGC CGAGGTCATC AACTCCTCCG AGGCGAACTC CCGGCAGTTG CACACCCGAG CTCGCCGGCG CCTGGCCGAG GCACGTGGCG GCTCCGATCG CCGGGTGGAC CGGGGCTACC GCCGCGACCT GGTGGAGAGC TTCCTGGCAG CCGCGCAGCA GGGGGACCTG CCGGGGTTGG AGAAGGTGCT GGCCGAGGAC GTGACCGTGT GGGTGGACGG TGGCGGCAGG GTCGGCGCTG CCCGGCGGCC CATCTCAGGC GCCTCCCAGG TGGCGCGCTA CTTGGTGGGC TCGTTGAGCA TCGCCGGTGA GGGGGTGAGG CTGTTGGCTG CGGAGGTGAA CGGCGCGCTG GGGCTGCTGG CTCGGGCCGG TGAGGAGCTG GTCGGCGTGC TGGTGCCGGA GACGTCGGAG GGCCGGATCA GCGGGATTCG CATCATCGCC AACCCCGACA AGCTCCGGTT GTCACATTCC AGAGGCCTAT CCGGTTCTTA A
|
Protein sequence | MTVDAVEDFE RHRSKLFGLA YRMLGSAEEA EDVVQDAFLR WHQASAVESP WAWLAKVATN LCVNRLTSAR ARRVSYVGSW LPEPVLTAGG ALGPLDSAEQ REFVSLAFLV LLERLNPVER AVFVLREAFD YSHREVAEVI NSSEANSRQL HTRARRRLAE ARGGSDRRVD RGYRRDLVES FLAAAQQGDL PGLEKVLAED VTVWVDGGGR VGAARRPISG ASQVARYLVG SLSIAGEGVR LLAAEVNGAL GLLARAGEEL VGVLVPETSE GRISGIRIIA NPDKLRLSHS RGLSGS
|
| |