Gene Sros_4558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4558 
Symbol 
ID8667852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5074848 
End bp5075738 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content69% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003340164 
Protein GI271965968 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.125651 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.119283 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGTTG ATGCGGTTGA GGACTTCGAG CGGCACCGCT CGAAGTTGTT CGGGTTGGCC 
TATCGGATGC TGGGTTCGGC TGAGGAGGCC GAGGACGTCG TCCAGGACGC CTTCCTGCGT
TGGCATCAGG CGAGCGCTGT CGAGTCGCCG TGGGCGTGGC TGGCCAAGGT CGCCACCAAC
CTGTGCGTGA ACCGGTTGAC GTCCGCTCGT GCGCGCCGGG TGAGCTATGT CGGTTCCTGG
CTGCCGGAGC CGGTGTTGAC CGCGGGCGGC GCTTTGGGCC CGCTGGACAG CGCCGAGCAG
CGGGAGTTCG TCTCGCTGGC CTTCCTGGTG CTGCTGGAAA GGCTTAACCC GGTGGAGCGC
GCGGTGTTCG TCCTGCGCGA AGCCTTCGAC TACAGCCATC GGGAGGTGGC CGAGGTCATC
AACTCCTCCG AGGCGAACTC CCGGCAGTTG CACACCCGAG CTCGCCGGCG CCTGGCCGAG
GCACGTGGCG GCTCCGATCG CCGGGTGGAC CGGGGCTACC GCCGCGACCT GGTGGAGAGC
TTCCTGGCAG CCGCGCAGCA GGGGGACCTG CCGGGGTTGG AGAAGGTGCT GGCCGAGGAC
GTGACCGTGT GGGTGGACGG TGGCGGCAGG GTCGGCGCTG CCCGGCGGCC CATCTCAGGC
GCCTCCCAGG TGGCGCGCTA CTTGGTGGGC TCGTTGAGCA TCGCCGGTGA GGGGGTGAGG
CTGTTGGCTG CGGAGGTGAA CGGCGCGCTG GGGCTGCTGG CTCGGGCCGG TGAGGAGCTG
GTCGGCGTGC TGGTGCCGGA GACGTCGGAG GGCCGGATCA GCGGGATTCG CATCATCGCC
AACCCCGACA AGCTCCGGTT GTCACATTCC AGAGGCCTAT CCGGTTCTTA A
 
Protein sequence
MTVDAVEDFE RHRSKLFGLA YRMLGSAEEA EDVVQDAFLR WHQASAVESP WAWLAKVATN 
LCVNRLTSAR ARRVSYVGSW LPEPVLTAGG ALGPLDSAEQ REFVSLAFLV LLERLNPVER
AVFVLREAFD YSHREVAEVI NSSEANSRQL HTRARRRLAE ARGGSDRRVD RGYRRDLVES
FLAAAQQGDL PGLEKVLAED VTVWVDGGGR VGAARRPISG ASQVARYLVG SLSIAGEGVR
LLAAEVNGAL GLLARAGEEL VGVLVPETSE GRISGIRIIA NPDKLRLSHS RGLSGS