Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_4537 |
Symbol | |
ID | 8667831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 5054939 |
End bp | 5056174 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | carotenoid oxygenase |
Protein accession | YP_003340145 |
Protein GI | 271965949 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.368379 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGTCA CGGAGCACGT CGACCCGATC ATGGCGCTCA TGTCCGCGGC GCCCCGCCGC CACCGGACGC ACGACGAGCC GCTGCCGGTC GACGGCGTCA TACCTTCCGG CCTGGACGGC GCGTTCGTGC AGGCGAGCAC GTATCCCGGG GGATCGTGGC AGTCGCACGC CACGGCCGGC CCCGTCCTCT TCTCCGGCGT ACGGCTCGGC GGCGGCACCG CTCGGCGCCT CACGACGGCC GGGGAGTTCG GCGGCCACCC GCTGGAGCGG ATGCCGGACC TCGCGACCTG GATCCGGCCC GCCGGATCCG CCGCCCGGCC GCCGGACGGG CCGTGGAGCG CGAGCCTCGC GCCGCCGGTC CAGGACCGGG CCACGGCCGA ATGGCACACG ATCGCCACCT ATCCCGGTCT GGGCTGCGCG GAGCACCTGA CCCTCGGGAC GGACGGCGGC ATCCGCGACG CCCGGCCCTT CGCCCTCGAC GGTGCACCGC TCATGCACGC GGTCGCGCTC ACCGAACGGT TCGTCGTGGT GTTCGACCTG CCCGTGACCT ATCACCGGGC GGCGGCGATG GTCGGCACCC GATTCCCCTA CCGCTGGCGG CGGGACCGGC CGGCGCGCAT CGGACTGCTG TCACGGCGGC CCGGCGACGC GACGGAACCC CGCTGGTTCC CGATCGACCC CTGCTACGTG TCCCATTCGG TCAACGCCTA CGACGACGGC GGCCGCGTCG TCGTGGACGC CGTCCGCCAC GAGCGGGCCT TCGACGCTCC GTCGTGGGAC GGCGAGGACG GCGCCGGGGC GCCGCGGGTG CACCGGTGGA CGCTCGACCT GGGGAGCGGC GCGGCGGAGG AGCGGCCGCT GGTCGACTCC ATGACGCTGG CGTCGGTCGA CTCCCGGCGG GCCGGCCGCA GGCATCAGCT GATGTTCGGC CGCACCCCCG GCGGGCGGGC GCTGGTCGGC CACGACCTCG CGGCCGGCAG CACGCAGGTG CGGGAGCTCG CCCCGGGCCT GCGCGCCGGC CAGCCGGTCT TCGTCCCCCG TGGCCGCGCC GAGGGAGACG GCTGGCTCGT GGTCCTCACG CAGGACGGCG CGCGGCGGCG GAGCGAGCTG CTCGTGCTCG ACGCGCTCCA CCTGAACGGC CGGCCCCAGG CGGTGGTCCA CCTCCCGGCC CTCCTGCCGG ACGCGCGGCA CACCACCTGG ATGACCACAC CCGCCGGGCG TGCGCACCGG CGGTGA
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Protein sequence | MTVTEHVDPI MALMSAAPRR HRTHDEPLPV DGVIPSGLDG AFVQASTYPG GSWQSHATAG PVLFSGVRLG GGTARRLTTA GEFGGHPLER MPDLATWIRP AGSAARPPDG PWSASLAPPV QDRATAEWHT IATYPGLGCA EHLTLGTDGG IRDARPFALD GAPLMHAVAL TERFVVVFDL PVTYHRAAAM VGTRFPYRWR RDRPARIGLL SRRPGDATEP RWFPIDPCYV SHSVNAYDDG GRVVVDAVRH ERAFDAPSWD GEDGAGAPRV HRWTLDLGSG AAEERPLVDS MTLASVDSRR AGRRHQLMFG RTPGGRALVG HDLAAGSTQV RELAPGLRAG QPVFVPRGRA EGDGWLVVLT QDGARRRSEL LVLDALHLNG RPQAVVHLPA LLPDARHTTW MTTPAGRAHR R
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