Gene Sros_4512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4512 
Symbol 
ID8667806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5030944 
End bp5032671 
Gene Length1728 bp 
Protein Length575 aa 
Translation table11 
GC content71% 
IMG OID 
ProductABC transporter component 
Protein accessionYP_003340120 
Protein GI271965924 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.5335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.299966 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGAA TGCTGCTGCG CGTGCTCGGA GACCAGTACG CCCGGCCGAT ACGTCGCACC 
GTGGCCCTGA TGACGACGAC CGCGATAGCC GAGGGGTTGT CCTACGCACT ACTGGTCCCG
GTGCTGCGGG CCCTGTTCGG CAGCGAGCCC GCAGCCGCCT GGCCCTGGCT GATCGCGTTC
GGGGCCGTGG TCGCGGCCTA CGCGGCGCTG CGCTACATCA GTGATCTGTC CGGTTTCCGC
GTCGGGACCA CGATGTTGCG CGGCATGTAT CACCGGCTCG GCGATCATCT GGCCCGGTTG
CCCATCGGCT GGTACAACGC GGGCCGCATC GGGCAGGTCT CCGCCCTGGC CAGCGGCGGC
GTCCTGCAGG CGATGAGCGT GATCGCACAT CTGCTGGCAC CGTCCATCTC CGCCAGCGTG
ACTCCCCTGA CGATCATTGT CGTGATGCTC GCCTTCAACT GGCAGCTGGG GCTGGCCGCG
CTGGTCGCGG TACCGGTCGT GGCGGCGATC CAGCTCTGGA CCGCACGCTC GACGGCCGCC
ACCGATGCCG AGCGCGCCGA ACGCGACCAG GAGGCCACCG GGCGCGTCAT CGAATACCTC
CAGGCCCAGC CGGTGCTGCG CGCCGGCGGC CGGAGCGGCG AACGCTTCCG GTTGCTCGAC
GACTCGCTGC GGGAGGTCCA GCGCGTCTCC CGCCGCAGCG TGCTGTCGGT GCTGCCCGGC
GCGGTGGGCC TGACGCTCAC CGTGCAGGCG ATGTTCACCG TGCTGCTGGT CCTGGGCGCC
TCCCTCGCGC TCGGCGGGAA CATCGGCGCG GCAGAGGTTC TGGCGATCCT GGTGCTGGCC
GCCCGCTGCG CCGATCCGCT GCTGTCGCTG GCCGATATCG GCAGCCAGCT CCGCGGCGCA
CGCTCGGAGC TGGCCAGGCT CGACACGGTA CTGCGCACCG AGCCGCTGCC GGAAGCCCGT
GAACCGATCC AGCCGGTAGG CCGCGACCTG GAGTTCGACT CCGTCGCCTT CCGGCACGGC
GGCCGCACGG TGATCGACGA GGTGTCGTTG TCGGTGCCGG AGGGGCAGCG GCTTGCCGTC
GTCGGACCCT CGGGTGCGGG CAAGAGCACG CTGCTGCAGT TGCTCGCCCG CTTCTACGAC
GTGGACGCGG GCGCGGTGCG CGTGGGGGGT GCGGACGTGC GCGCCATCAG CACCGAGGTG
CTGATGGCGC AGATCGCCAT CGTCTTCCAG GAGGTCTATC TCTTCGACGG CACGATCGAG
GAGAACGTGC GCCTGGGCCG TCCCGACGCG GGCGTTGCCG AGGTACGGGC GGCAGCGACC
GCCGCGCGGT TGGACGAGGT GATCGAGCGG CTGCCCGGCG GGTGGGCGGC GAACGTCGGC
GAGGGCGGCA CACTGCTGTC GGGTGGGGAG CGCCAGCGTG TCTCGATCGC GCGAGCGCTG
CTGAAGAACG CGCCCATCGT GCTGCTGGAC GAGGTGACCT CCGCCCTGGA CCCGGTGAAC
GAGGCGGCCG TCCACGAGGG CATCGAGCGC CTGATGGCGG GCCGGACGGT GGTGATGGTC
GCGCATCGGA TGCGGACCGT CCAACGCGCC GACCGCATCG CCTTCCTGGA CGGCGGCCGG
ATCGTGGAAG AAGGCAGCCA TCACGAGCTG CTGCGCCACG GCGGCCGCTA CGCCGACTTC
TGGAACGCCT CCCTGACACC GGCAACTGCA TGGGACGGCC GGGGCTAG
 
Protein sequence
MIRMLLRVLG DQYARPIRRT VALMTTTAIA EGLSYALLVP VLRALFGSEP AAAWPWLIAF 
GAVVAAYAAL RYISDLSGFR VGTTMLRGMY HRLGDHLARL PIGWYNAGRI GQVSALASGG
VLQAMSVIAH LLAPSISASV TPLTIIVVML AFNWQLGLAA LVAVPVVAAI QLWTARSTAA
TDAERAERDQ EATGRVIEYL QAQPVLRAGG RSGERFRLLD DSLREVQRVS RRSVLSVLPG
AVGLTLTVQA MFTVLLVLGA SLALGGNIGA AEVLAILVLA ARCADPLLSL ADIGSQLRGA
RSELARLDTV LRTEPLPEAR EPIQPVGRDL EFDSVAFRHG GRTVIDEVSL SVPEGQRLAV
VGPSGAGKST LLQLLARFYD VDAGAVRVGG ADVRAISTEV LMAQIAIVFQ EVYLFDGTIE
ENVRLGRPDA GVAEVRAAAT AARLDEVIER LPGGWAANVG EGGTLLSGGE RQRVSIARAL
LKNAPIVLLD EVTSALDPVN EAAVHEGIER LMAGRTVVMV AHRMRTVQRA DRIAFLDGGR
IVEEGSHHEL LRHGGRYADF WNASLTPATA WDGRG